Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026755.1-P | Field mustard | nucleus | 98.09 | 98.72 |
| AT1G15580.1 | Thale cress | nucleus | 82.17 | 79.14 |
| CDY71748 | Canola | cytosol, nucleus, plastid | 52.23 | 47.4 |
| CDX75834 | Canola | cytosol, nucleus, plastid | 57.32 | 46.39 |
| CDX82428 | Canola | cytosol, nucleus, plastid | 56.69 | 45.88 |
| CDY21845 | Canola | cytosol, extracellular, nucleus | 57.32 | 45.69 |
| CDY20135 | Canola | cytosol, nucleus, plastid | 57.32 | 45.69 |
| CDX92972 | Canola | nucleus | 49.04 | 45.03 |
| CDY40837 | Canola | nucleus | 49.04 | 45.03 |
| CDY35493 | Canola | nucleus | 49.04 | 45.03 |
| CDY10346 | Canola | nucleus | 49.04 | 44.77 |
| CDY10692 | Canola | nucleus | 49.04 | 44.77 |
| CDX94876 | Canola | nucleus | 47.77 | 43.86 |
| CDY36883 | Canola | nucleus | 47.13 | 43.02 |
| CDY53735 | Canola | nucleus | 46.5 | 42.44 |
| CDY26042 | Canola | nucleus | 52.87 | 42.35 |
| CDY68807 | Canola | nucleus | 52.23 | 41.84 |
| CDY32536 | Canola | cytosol, nucleus, plastid | 45.86 | 40.0 |
| CDX89833 | Canola | cytosol, nucleus, plastid | 47.13 | 39.78 |
| CDY32934 | Canola | cytosol, nucleus, plastid | 47.77 | 39.27 |
| CDY69497 | Canola | cytosol, nucleus, plastid | 47.77 | 39.27 |
| CDY18213 | Canola | cytosol, nucleus, plastid | 46.5 | 39.25 |
| CDY10069 | Canola | nucleus | 45.86 | 39.13 |
| CDY53800 | Canola | nucleus | 45.86 | 38.3 |
| CDY41894 | Canola | cytosol, nucleus, plastid | 52.87 | 35.93 |
| CDY10694 | Canola | mitochondrion | 39.49 | 35.63 |
| CDY21111 | Canola | cytosol, nucleus, plastid | 53.5 | 35.59 |
| CDY30017 | Canola | cytosol, nucleus, plastid | 52.23 | 34.6 |
| CDX89832 | Canola | nucleus | 48.41 | 33.93 |
| CDY18214 | Canola | nucleus | 47.77 | 33.48 |
| CDY32537 | Canola | nucleus | 48.41 | 33.33 |
| CDY10068 | Canola | cytosol, nucleus, plastid | 48.41 | 33.33 |
| CDY15493 | Canola | cytosol, nucleus, plastid | 48.41 | 33.19 |
| CDX92973 | Canola | cytosol, nucleus, plastid | 49.68 | 32.91 |
| CDY40881 | Canola | cytosol | 36.94 | 31.69 |
| CDY30781 | Canola | cytosol, nucleus, plastid | 48.41 | 31.67 |
| CDY63910 | Canola | cytosol, nucleus, plastid | 48.41 | 31.67 |
| CDY62130 | Canola | cytosol, nucleus, plastid | 46.5 | 31.33 |
| CDY06836 | Canola | nucleus | 49.68 | 30.95 |
| CDY47148 | Canola | nucleus | 45.86 | 30.9 |
| CDY10349 | Canola | endoplasmic reticulum, extracellular | 48.41 | 30.89 |
| CDY50113 | Canola | cytosol, nucleus, plastid | 33.76 | 29.28 |
| CDY50750 | Canola | nucleus, plastid | 52.87 | 28.52 |
| CDY25617 | Canola | nucleus | 46.5 | 27.44 |
| CDX89499 | Canola | nucleus | 46.5 | 26.94 |
| CDY68170 | Canola | nucleus, plastid | 46.5 | 23.47 |
| CDY18679 | Canola | plastid | 46.5 | 23.4 |
| CDY37837 | Canola | mitochondrion | 43.31 | 22.97 |
| CDY66936 | Canola | cytosol, nucleus, plastid | 40.13 | 22.83 |
| CDY08767 | Canola | cytosol, nucleus, plastid | 43.31 | 20.48 |
| CDY45607 | Canola | cytosol, nucleus, plastid | 42.68 | 20.36 |
| CDY63072 | Canola | nucleus | 47.77 | 18.84 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | GO:A0A078IQ93 | UniProt:A0A078IQ93 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| EnsemblPlants:CDY53305 | ProteinID:CDY53305 | ProteinID:CDY53305.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009734 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00010417001 | InterPro:IPR000270 |
| InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF87 | SUPFAM:SSF54277 |
| UniParc:UPI0004EDEDAD | : | : | : | : | : |
Description
BnaA09g56620DAuxin-responsive protein IAA5 [Source:Projected from Arabidopsis thaliana (AT1G15580) UniProtKB/Swiss-Prot;Acc:P33078]
Coordinates
chrLK033186:-:28265..28988
Molecular Weight (calculated)
17918.7 Da
IEP (calculated)
6.005
GRAVY (calculated)
-0.268
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MADESNLAHE ITELRLGLPG DIIVTGKKRV SSEVESELKC EPATKSQVVG WPPVCSFRRK NSLEETRTAY VKVRSVDGAA FLREIDLKMY KRYQDLASAL
101: QILFGCFITF DDTLKESECV PIYEDRDGDW MLAGDVPWEM FVASCKRLRV MKRSVMK
101: QILFGCFITF DDTLKESECV PIYEDRDGDW MLAGDVPWEM FVASCKRLRV MKRSVMK
001: MANESNNLGL EITELRLGLP GDIVVSGESI SGKKRASPEV EIDLKCEPAK KSQVVGWPPV CSYRRKNSLE RTKSSYVKVS VDGAAFLRKI DLEMYKCYQD
101: LASALQILFG CYINFDDTLK ESECVPIYED KDGDWMLAGD VPWEMFLGSC KRLRIMKRSC NRG
101: LASALQILFG CYINFDDTLK ESECVPIYED KDGDWMLAGD VPWEMFLGSC KRLRIMKRSC NRG
Arabidopsis Description
IAA5Auxin-responsive protein IAA5 [Source:UniProtKB/Swiss-Prot;Acc:P33078]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.