Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- mitochondrion 1
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25909 | Canola | nucleus, plastid | 93.89 | 97.13 |
| Bra002729.1-P | Field mustard | nucleus | 76.11 | 85.62 |
| CDY61501 | Canola | nucleus, plastid | 62.22 | 64.0 |
| CDY47946 | Canola | nucleus | 60.56 | 62.29 |
| AT5G57420.1 | Thale cress | nucleus, plastid | 55.56 | 58.48 |
| PGSC0003DMT400093571 | Potato | nucleus | 30.0 | 46.55 |
| HORVU2Hr1G112440.1 | Barley | cytosol, nucleus | 18.33 | 46.48 |
| KRH33583 | Soybean | cytosol, nucleus | 27.22 | 46.23 |
| VIT_11s0052g00870.t01 | Wine grape | nucleus | 40.56 | 43.45 |
| GSMUA_Achr6P03870_001 | Banana | cytosol | 31.11 | 43.41 |
| Solyc07g019450.2.1 | Tomato | nucleus, plastid | 33.33 | 40.82 |
| Zm00001d026480_P001 | Maize | nucleus | 37.78 | 40.24 |
| KRG90334 | Soybean | cytosol, plastid | 30.56 | 39.29 |
| TraesCS2D01G506900.1 | Wheat | nucleus, plastid | 36.11 | 39.16 |
| TraesCS2B01G534500.1 | Wheat | nucleus, plastid | 35.56 | 38.79 |
| EES11567 | Sorghum | cytosol, plastid | 35.56 | 38.32 |
| Os04t0653300-00 | Rice | nucleus | 35.56 | 37.87 |
| TraesCS2A01G506100.1 | Wheat | nucleus, plastid | 35.0 | 37.72 |
| GSMUA_Achr7P16390_001 | Banana | nucleus | 35.0 | 36.0 |
| GSMUA_Achr10P... | Banana | nucleus | 33.33 | 35.29 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | GO:A0A078HK96 | UniProt:A0A078HK96 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| EnsemblPlants:CDY38297 | ProteinID:CDY38297 | ProteinID:CDY38297.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00065664001 | InterPro:IPR000270 | InterPro:PB1_dom |
| PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF7 | UniParc:UPI0004EDD5BF | SEG:seg |
Description
BnaA10g11450DAuxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A078HK96]
Coordinates
chrLK032420:+:324310..325233
Molecular Weight (calculated)
20058.3 Da
IEP (calculated)
4.344
GRAVY (calculated)
-0.411
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MFHQDNTTQQ RRDTTTRTPS FMPNTLSRNP NSSSSSGAAG RFPRFGLNVD DDLVSSVVPP VTVVLEGRSI CQRVSLDKHE SYQSLALVLR QMFVDGADST
101: SGTDDLDLSN AIPGHLIAYE DMENDLLLAG DLSWNFFFFF ANIWDYMEVD ERFGFVRTQG LCSGSEENSN LAGERELKKG
101: SGTDDLDLSN AIPGHLIAYE DMENDLLLAG DLSWNFFFFF ANIWDYMEVD ERFGFVRTQG LCSGSEENSN LAGERELKKG
001: MNSFEPQSQD SLQRRFHQDN STTQQPRDTT TPFIPKPASK NHNNSNSSSG AAGRSFQGFG LNVEDDLVSS VVPPVTVVLE GRSICQRISL DKHGSYQSLA
101: SALRQMFVDG ADSTDDLDLS NAIPGHLIAY EDMENDLLLA GDLTWKDFVR VAKRIRILPV KGNTRQVKRN E
101: SALRQMFVDG ADSTDDLDLS NAIPGHLIAY EDMENDLLLA GDLTWKDFVR VAKRIRILPV KGNTRQVKRN E
Arabidopsis Description
IAA33Auxin-responsive protein IAA33 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKM7]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.