Factsheet for AT5G57420.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47946	Canola	nucleus	80.12	78.29
CDY61501	Canola	nucleus, plastid	78.95	77.14
Bra002729.1-P	Field mustard	nucleus	69.01	73.75
HORVU2Hr1G112440.1	Barley	cytosol, nucleus	26.9	64.79
CDY25909	Canola	nucleus, plastid	57.89	56.9
KRH33583	Soybean	cytosol, nucleus	34.5	55.66
CDY38297	Canola	nucleus, plastid	58.48	55.56
VIT_11s0052g00870.t01	Wine grape	nucleus	54.39	55.36
PGSC0003DMT400093571	Potato	nucleus	36.84	54.31
Solyc07g019450.2.1	Tomato	nucleus, plastid	45.61	53.06
GSMUA_Achr6P03870_001	Banana	cytosol	36.26	48.06
TraesCS2B01G534500.1	Wheat	nucleus, plastid	46.2	47.88
TraesCS2D01G506900.1	Wheat	nucleus, plastid	46.2	47.59
TraesCS2A01G506100.1	Wheat	nucleus, plastid	45.61	46.71
Os04t0653300-00	Rice	nucleus	45.61	46.15
Zm00001d026480_P001	Maize	nucleus	42.69	43.2
EES11567	Sorghum	cytosol, plastid	42.11	43.11
GSMUA_Achr10P...	Banana	nucleus	42.69	42.94
GSMUA_Achr7P16390_001	Banana	nucleus	43.86	42.86
KRG90334	Soybean	cytosol, plastid	33.33	40.71

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.1	EntrezGene:835848	UniProt:A0A178UQ30	EMBL:AB493796	ProteinID:ADB93688.2
ProteinID:ADL70831.1	ProteinID:ADL70832.1	ProteinID:ADL70835.1	ProteinID:ADL70837.1	ProteinID:ADL70838.1	ProteinID:ADL70840.1
ProteinID:ADL70841.1	ProteinID:ADL70842.1	ProteinID:AED96901.1	ArrayExpress:AT5G57420	EnsemblPlantsGene:AT5G57420	RefSeq:AT5G57420
TAIR:AT5G57420	RefSeq:AT5G57420-TAIR-G	EnsemblPlants:AT5G57420.1	TAIR:AT5G57420.1	InterPro:AUX/IAA_dom	InterPro:AUX_IAA
EMBL:AY669804	ProteinID:BAB08779.1	UniProt:C0SVU3	GO:GO:0003674	GO:GO:0003700	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009719	GO:GO:0009733	GO:GO:0009734	GO:GO:0009987	Symbol:IAA33
InterPro:IPR000270	RefSeq:NP_200552.1	ProteinID:OAO96136.1	InterPro:PB1_dom	PFAM:PF02309	PO:PO:0000037
PO:PO:0001078	PO:PO:0001081	PO:PO:0004507	PO:PO:0007611	PO:PO:0007616	PO:PO:0009005
PO:PO:0009009	PO:PO:0009010	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009052	PO:PO:0025022	PFscan:PS51745	PANTHER:PTHR31734	PANTHER:PTHR31734:SF7
UniProt:Q9FKM7	SUPFAM:SSF54277	UniParc:UPI000009C7E6	SEG:seg	:	:

Description

IAA33Auxin-responsive protein IAA33 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKM7]

Coordinates

chr5:+:23269914..23271092

Molecular Weight (calculated)

18943.1 Da

IEP (calculated)

6.518

GRAVY (calculated)

-0.604

Length

171 amino acids

Sequence
(BLAST)

001: MNSFEPQSQD SLQRRFHQDN STTQQPRDTT TPFIPKPASK NHNNSNSSSG AAGRSFQGFG LNVEDDLVSS VVPPVTVVLE GRSICQRISL DKHGSYQSLA
101: SALRQMFVDG ADSTDDLDLS NAIPGHLIAY EDMENDLLLA GDLTWKDFVR VAKRIRILPV KGNTRQVKRN E

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.