Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011082.1-P | Field mustard | nucleus | 84.26 | 88.62 |
| CDY06836 | Canola | nucleus | 72.79 | 88.1 |
| GSMUA_Achr2P15340_001 | Banana | nucleus | 50.49 | 62.86 |
| GSMUA_Achr10P... | Banana | nucleus | 55.41 | 60.79 |
| KRH39325 | Soybean | nucleus | 60.66 | 60.26 |
| VIT_11s0016g03540.t01 | Wine grape | nucleus | 62.3 | 59.38 |
| GSMUA_Achr10P... | Banana | nucleus | 53.11 | 58.27 |
| KRH60250 | Soybean | nucleus | 53.77 | 57.14 |
| GSMUA_Achr10P... | Banana | nucleus | 54.43 | 56.85 |
| GSMUA_Achr9P06290_001 | Banana | nucleus | 50.82 | 56.57 |
| GSMUA_Achr7P10930_001 | Banana | nucleus | 49.51 | 56.55 |
| KRH74730 | Soybean | plastid | 29.84 | 56.52 |
| TraesCS7A01G331100.1 | Wheat | nucleus | 43.93 | 55.83 |
| TraesCS7D01G339300.1 | Wheat | nucleus | 43.93 | 55.83 |
| GSMUA_Achr2P09210_001 | Banana | nucleus | 44.92 | 55.24 |
| GSMUA_Achr6P26730_001 | Banana | nucleus | 50.49 | 55.2 |
| PGSC0003DMT400001013 | Potato | nucleus | 50.49 | 55.2 |
| Zm00001d037774_P001 | Maize | cytosol | 43.93 | 54.92 |
| TraesCS7B01G242800.1 | Wheat | nucleus | 43.93 | 54.92 |
| OQU77659 | Sorghum | nucleus | 44.59 | 54.62 |
| AT5G43700.1 | Thale cress | cytosol, extracellular, nucleus | 33.11 | 54.3 |
| AT4G14560.1 | Thale cress | nucleus | 29.84 | 54.17 |
| Solyc12g007230.1.1 | Tomato | nucleus | 52.13 | 53.9 |
| EER89802 | Sorghum | cytosol | 43.93 | 53.82 |
| AT3G04730.1 | Thale cress | cytosol, nucleus, plastid | 41.31 | 53.39 |
| Os05t0230700-01 | Rice | nucleus | 44.92 | 53.31 |
| GSMUA_Achr3P03400_001 | Banana | nucleus | 53.77 | 52.56 |
| Os06t0335500-01 | Rice | nucleus | 45.57 | 52.26 |
| HORVU3Hr1G031460.1 | Barley | cytosol | 39.34 | 52.17 |
| AT1G04250.1 | Thale cress | cytosol, nucleus, plastid | 39.02 | 51.97 |
| AT3G23050.1 | Thale cress | cytosol, nucleus, plastid | 41.31 | 51.85 |
| HORVU0Hr1G021630.1 | Barley | cytosol, mitochondrion, nucleus | 30.82 | 51.09 |
| Os01t0231000-01 | Rice | nucleus | 43.61 | 50.57 |
| TraesCS3D01G162700.1 | Wheat | cytosol | 39.02 | 50.21 |
| TraesCS3B01G181500.1 | Wheat | cytosol | 40.0 | 49.8 |
| TraesCS3A01G155200.1 | Wheat | cytosol | 40.0 | 49.8 |
| AT4G14550.2 | Thale cress | nucleus | 38.03 | 49.57 |
| AT1G15580.1 | Thale cress | nucleus | 26.23 | 49.08 |
| AT3G15540.1 | Thale cress | nucleus | 30.49 | 47.21 |
| KRH41538 | Soybean | golgi, plasma membrane | 53.44 | 45.66 |
| AT1G52830.1 | Thale cress | nucleus | 28.2 | 45.5 |
| TraesCS3B01G303900.1 | Wheat | nucleus, plastid | 37.7 | 44.92 |
| TraesCS3A01G270000.1 | Wheat | nucleus, plastid | 38.03 | 44.44 |
| TraesCS3D01G269700.1 | Wheat | nucleus, plastid | 37.7 | 44.4 |
| Os01t0675700-01 | Rice | nucleus | 39.02 | 43.91 |
| Zm00001d043878_P001 | Maize | nucleus, plastid | 38.69 | 43.87 |
| HORVU3Hr1G062160.2 | Barley | nucleus, plastid | 37.38 | 43.85 |
| TraesCS1A01G390200.1 | Wheat | plastid | 37.38 | 43.68 |
| TraesCS1B01G418400.1 | Wheat | nucleus | 35.08 | 43.67 |
| Os05t0559400-01 | Rice | nucleus | 40.0 | 43.42 |
| KXG33104 | Sorghum | nucleus, plastid | 39.34 | 43.32 |
| TraesCS1D01G398400.1 | Wheat | nucleus | 37.38 | 43.18 |
| AT2G22670.4 | Thale cress | nucleus | 47.54 | 42.9 |
| KXG22521 | Sorghum | nucleus | 38.36 | 41.94 |
| Zm00001d009532_P001 | Maize | nucleus | 38.36 | 41.64 |
| AT5G65670.1 | Thale cress | nucleus | 45.25 | 40.83 |
| Zm00001d038980_P001 | Maize | cytosol, nucleus, plastid | 38.36 | 40.48 |
| Zm00001d010411_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 41.64 | 38.6 |
| AT3G23030.2 | Thale cress | vacuole | 30.82 | 36.02 |
| HORVU3Hr1G088810.1 | Barley | plastid | 27.54 | 35.44 |
| HORVU1Hr1G086070.6 | Barley | plastid | 35.41 | 34.5 |
| AT1G04240.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus, plastid | 32.46 | 34.26 |
| Zm00001d011588_P003 | Maize | nucleus, plastid | 38.03 | 34.02 |
| Zm00001d024008_P001 | Maize | mitochondrion | 28.2 | 24.71 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | PDB:5NQV | EntrezGene:829029 | UniProt:A0A178V3Y7 | ProteinID:AEE85584.1 |
| EMBL:AF087936 | EMBL:AF332402 | EMBL:AJ458326 | ArrayExpress:AT4G29080 | EnsemblPlantsGene:AT4G29080 | RefSeq:AT4G29080 |
| TAIR:AT4G29080 | RefSeq:AT4G29080-TAIR-G | EnsemblPlants:AT4G29080.1 | TAIR:AT4G29080.1 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| EMBL:AY053404 | EMBL:AY133516 | Unigene:At.3406 | ProteinID:CAB43922.1 | ProteinID:CAB79666.1 | GO:GO:0003674 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009734 |
| GO:GO:0009987 | InterPro:IPR000270 | RefSeq:NP_194637.1 | ProteinID:OAP00919.1 | Symbol:PAP2 | InterPro:PB1_dom |
| PFAM:PF02309 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF39 | UniProt:Q9ZSY8 | SUPFAM:SSF54277 |
| UniParc:UPI00000A0E4C | SEG:seg | : | : | : | : |
Description
IAA27Auxin-responsive protein IAA27 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSY8]
Coordinates
chr4:-:14323296..14325361
Molecular Weight (calculated)
33197.3 Da
IEP (calculated)
8.826
GRAVY (calculated)
-0.530
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVSVAAEHD YIGLSEFPTM EATTMSDKTK TRDNNNGLNF KATELRLGLP GSESPERVDS RFLALNKSSC PVSGAKRVFS DAINDSNKWV FSPGSTTATG
101: DVGSGSGPRT SVVKDGKSTT FTKPAVPVKE KKSSATAPAS KAQVVGWPPI RSFRKNSMAS SQSQKPGNNS ETEEAEAKSG PEQPCLYVKV SMEGAPYLRK
201: IDLKTYKSYL ELSSALEKMF SCFTIGQFGS HGGCGRDGLN ESRLTDLLRG SEYVVTYEDK DSDWMLVGDV PWEMFICSCK KLRIMKSSEA IGLAPRVMEK
301: CRSRN
101: DVGSGSGPRT SVVKDGKSTT FTKPAVPVKE KKSSATAPAS KAQVVGWPPI RSFRKNSMAS SQSQKPGNNS ETEEAEAKSG PEQPCLYVKV SMEGAPYLRK
201: IDLKTYKSYL ELSSALEKMF SCFTIGQFGS HGGCGRDGLN ESRLTDLLRG SEYVVTYEDK DSDWMLVGDV PWEMFICSCK KLRIMKSSEA IGLAPRVMEK
301: CRSRN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.