Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82428 | Canola | cytosol, nucleus, plastid | 91.88 | 93.3 |
| Bra001598.1-P | Field mustard | nucleus | 91.88 | 93.3 |
| CDX75834 | Canola | cytosol, nucleus, plastid | 91.37 | 92.78 |
| Bra027232.1-P | Field mustard | nucleus | 89.85 | 91.24 |
| CDY20135 | Canola | cytosol, nucleus, plastid | 90.36 | 90.36 |
| Bra021117.1-P | Field mustard | cytosol, nucleus, plastid | 90.36 | 90.36 |
| CDY21845 | Canola | cytosol, extracellular, nucleus | 89.34 | 89.34 |
| CDY71748 | Canola | cytosol, nucleus, plastid | 77.16 | 87.86 |
| KRH47514 | Soybean | nucleus | 61.93 | 65.24 |
| KRH09813 | Soybean | nucleus | 59.39 | 62.57 |
| KRH44390 | Soybean | nucleus | 61.93 | 62.56 |
| AT1G15580.1 | Thale cress | nucleus | 50.25 | 60.74 |
| AT1G52830.1 | Thale cress | nucleus | 57.87 | 60.32 |
| KRH23504 | Soybean | nucleus | 57.87 | 60.32 |
| PGSC0003DMT400006800 | Potato | mitochondrion | 55.33 | 55.9 |
| VIT_09s0002g05150.t01 | Wine grape | cytosol, nucleus, plastid | 54.31 | 55.73 |
| Solyc03g120380.2.1 | Tomato | nucleus | 53.81 | 55.21 |
| PGSC0003DMT400042572 | Potato | nucleus | 29.44 | 53.7 |
| AT4G14560.1 | Thale cress | nucleus | 39.59 | 46.43 |
| AT5G43700.1 | Thale cress | cytosol, extracellular, nucleus | 42.64 | 45.16 |
| AT3G04730.1 | Thale cress | cytosol, nucleus, plastid | 47.21 | 39.41 |
| AT1G04250.1 | Thale cress | cytosol, nucleus, plastid | 45.69 | 39.3 |
| AT3G23050.1 | Thale cress | cytosol, nucleus, plastid | 47.21 | 38.27 |
| AT4G14550.2 | Thale cress | nucleus | 44.16 | 37.18 |
| AT3G23030.2 | Thale cress | vacuole | 43.15 | 32.57 |
| AT4G29080.1 | Thale cress | nucleus | 47.21 | 30.49 |
| AT1G04240.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus, plastid | 43.15 | 29.41 |
| AT5G65670.1 | Thale cress | nucleus | 45.18 | 26.33 |
| AT2G22670.4 | Thale cress | nucleus | 44.67 | 26.04 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | EntrezGene:820793 | ProteinID:AAF35420.1 | ProteinID:AEE75690.1 | ArrayExpress:AT3G15540 |
| EnsemblPlantsGene:AT3G15540 | RefSeq:AT3G15540 | TAIR:AT3G15540 | RefSeq:AT3G15540-TAIR-G | EnsemblPlants:AT3G15540.1 | TAIR:AT3G15540.1 |
| InterPro:AUX/IAA_dom | InterPro:AUX_IAA | EMBL:AY088753 | EMBL:AY669798 | Unigene:At.10479 | ProteinID:BAB02383.1 |
| EMBL:BT024586 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009734 | GO:GO:0009791 | GO:GO:0009908 |
| GO:GO:0009987 | GO:GO:0080086 | Symbol:IAA19 | InterPro:IPR000270 | RefSeq:NP_188173.1 | UniProt:O24409 |
| InterPro:PB1_dom | PFAM:PF02309 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF87 | UniProt:Q2VWA2 |
| SUPFAM:SSF54277 | EMBL:U49075 | UniParc:UPI000012669A | : | : | : |
Description
IAA19Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:Q2VWA2]
Coordinates
chr3:+:5264001..5265695
Molecular Weight (calculated)
21495.7 Da
IEP (calculated)
4.957
GRAVY (calculated)
-0.445
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKEGLGLEI TELRLGLPGR DVAEKMMKKR AFTEMNMTSS GSNSDQCESG VVSSGGDAEK VNDSPAAKSQ VVGWPPVCSY RKKNSCKEAS TTKVGLGYVK
101: VSMDGVPYLR KMDLGSSQGY DDLAFALDKL FGFRGIGVAL KDGDNCEYVT IYEDKDGDWM LAGDVPWGMF LESCKRLRIM KRSDATGFGL QPRGVDE
101: VSMDGVPYLR KMDLGSSQGY DDLAFALDKL FGFRGIGVAL KDGDNCEYVT IYEDKDGDWM LAGDVPWGMF LESCKRLRIM KRSDATGFGL QPRGVDE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.