Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92973 | Canola | cytosol, nucleus, plastid | 88.07 | 90.3 |
| Bra001900.1-P | Field mustard | cytosol, nucleus, plastid | 88.07 | 90.3 |
| Bra033886.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 88.07 | 88.43 |
| CDY30781 | Canola | cytosol, nucleus, plastid | 86.83 | 87.92 |
| CDY63910 | Canola | cytosol, nucleus, plastid | 86.83 | 87.92 |
| CDY10694 | Canola | mitochondrion | 62.14 | 86.78 |
| CDY10349 | Canola | endoplasmic reticulum, extracellular | 86.42 | 85.37 |
| AT4G14550.2 | Thale cress | nucleus | 75.72 | 78.63 |
| KRH34377 | Soybean | nucleus | 72.43 | 73.64 |
| VIT_05s0020g04690.t01 | Wine grape | cytosol, nucleus, plastid | 72.02 | 72.02 |
| Solyc09g083290.2.1 | Tomato | nucleus | 67.08 | 69.07 |
| PGSC0003DMT400015610 | Potato | nucleus | 66.67 | 68.07 |
| AT1G04250.1 | Thale cress | cytosol, nucleus, plastid | 63.37 | 67.25 |
| AT3G04730.1 | Thale cress | cytosol, nucleus, plastid | 64.2 | 66.1 |
| GSMUA_Achr10P... | Banana | nucleus | 60.49 | 61.0 |
| GSMUA_Achr8P20610_001 | Banana | nucleus | 60.91 | 60.66 |
| GSMUA_Achr9P10700_001 | Banana | nucleus | 58.02 | 58.51 |
| GSMUA_Achr4P21020_001 | Banana | nucleus | 59.67 | 58.47 |
| GSMUA_Achr9P25550_001 | Banana | nucleus | 58.44 | 58.44 |
| TraesCS5B01G058500.1 | Wheat | nucleus | 59.26 | 57.14 |
| TraesCS5D01G069300.1 | Wheat | nucleus | 59.26 | 57.14 |
| TraesCS5A01G058600.1 | Wheat | nucleus | 59.26 | 56.92 |
| TraesCS5D01G392000.1 | Wheat | nucleus | 53.09 | 55.6 |
| TraesCS5B01G386800.1 | Wheat | nucleus | 53.09 | 55.13 |
| TraesCS5A01G382600.1 | Wheat | nucleus | 52.67 | 54.94 |
| Os03t0742900-01 | Rice | vacuole | 53.09 | 54.66 |
| HORVU5Hr1G094220.1 | Barley | nucleus | 52.67 | 54.01 |
| AT5G43700.1 | Thale cress | cytosol, extracellular, nucleus | 41.15 | 53.76 |
| GSMUA_Achr4P22520_001 | Banana | nucleus | 55.97 | 53.75 |
| KRG92429 | Soybean | cytosol, nucleus, plastid | 72.84 | 53.47 |
| EER90896 | Sorghum | nucleus | 51.44 | 53.19 |
| Zm00001d033976_P002 | Maize | nucleus | 51.44 | 52.74 |
| AT4G14560.1 | Thale cress | nucleus | 36.21 | 52.38 |
| HORVU5Hr1G014300.4 | Barley | nucleus | 59.26 | 52.17 |
| Os03t0633500-01 | Rice | cytosol | 49.79 | 51.93 |
| TraesCS5B01G381900.1 | Wheat | cytosol, mitochondrion, nucleus | 53.5 | 51.38 |
| Zm00001d013302_P002 | Maize | nucleus | 48.15 | 51.32 |
| EES17334 | Sorghum | cytosol | 59.26 | 51.25 |
| Os12t0601300-01 | Rice | nucleus | 57.2 | 50.18 |
| AT1G15580.1 | Thale cress | nucleus | 32.51 | 48.47 |
| OQU91311 | Sorghum | cytosol, mitochondrion, nucleus | 52.26 | 48.11 |
| AT3G15540.1 | Thale cress | nucleus | 38.27 | 47.21 |
| HORVU5Hr1G093580.2 | Barley | cytosol, nucleus, peroxisome | 50.62 | 43.77 |
| AT4G29080.1 | Thale cress | nucleus | 51.85 | 41.31 |
| AT1G52830.1 | Thale cress | nucleus | 31.69 | 40.74 |
| TraesCS5D01G388300.2 | Wheat | cytosol | 51.85 | 40.0 |
| Zm00001d041416_P001 | Maize | nucleus | 55.56 | 39.24 |
| TraesCS5A01G378300.2 | Wheat | cytosol, mitochondrion, nucleus | 48.56 | 38.69 |
| AT5G65670.1 | Thale cress | nucleus | 49.79 | 35.8 |
| AT2G22670.4 | Thale cress | nucleus | 48.15 | 34.62 |
| AT3G23030.2 | Thale cress | vacuole | 36.63 | 34.1 |
| AT1G04240.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus, plastid | 39.92 | 33.56 |
Protein Annotations
| PDB:2P1N | PDB:2P1O | PDB:2P1Q | Gene3D:3.10.20.90 | MapMan:35.1 | EntrezGene:821879 |
| ProteinID:AEE76710.1 | EMBL:AF332395 | ArrayExpress:AT3G23050 | EnsemblPlantsGene:AT3G23050 | RefSeq:AT3G23050 | TAIR:AT3G23050 |
| RefSeq:AT3G23050-TAIR-G | EnsemblPlants:AT3G23050.1 | TAIR:AT3G23050.1 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | EMBL:AY054651 |
| EMBL:AY072461 | EMBL:AY087765 | ProteinID:BAB02096.1 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009414 | GO:GO:0009605 | GO:GO:0009606 | GO:GO:0009611 |
| GO:GO:0009628 | GO:GO:0009630 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009734 | GO:GO:0009753 |
| GO:GO:0009987 | Symbol:IAA7 | InterPro:IPR000270 | RefSeq:NP_188945.1 | InterPro:PB1_dom | PFAM:PF02309 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF89 | UniProt:Q38825 | SUPFAM:SSF54277 | EMBL:U18409 |
| UniParc:UPI0000000E29 | SEG:seg | : | : | : | : |
Description
IAA7Auxin-responsive protein IAA7 [Source:UniProtKB/Swiss-Prot;Acc:Q38825]
Coordinates
chr3:+:8194606..8197155
Molecular Weight (calculated)
26382.8 Da
IEP (calculated)
9.010
GRAVY (calculated)
-0.422
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MIGQLMNLKA TELCLGLPGG AEAVESPAKS AVGSKRGFSE TVDLMLNLQS NKEGSVDLKN VSAVPKEKTT LKDPSKPPAK AQVVGWPPVR NYRKNMMTQQ
101: KTSSGAEEAS SEKAGNFGGG AAGAGLVKVS MDGAPYLRKV DLKMYKSYQD LSDALAKMFS SFTMGNYGAQ GMIDFMNESK LMNLLNSSEY VPSYEDKDGD
201: WMLVGDVPWE MFVESCKRLR IMKGSEAVGL APRAMEKYCK NRS
101: KTSSGAEEAS SEKAGNFGGG AAGAGLVKVS MDGAPYLRKV DLKMYKSYQD LSDALAKMFS SFTMGNYGAQ GMIDFMNESK LMNLLNSSEY VPSYEDKDGD
201: WMLVGDVPWE MFVESCKRLR IMKGSEAVGL APRAMEKYCK NRS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.