Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH09813 | Soybean | nucleus | 92.06 | 93.05 |
| KRH47514 | Soybean | nucleus | 76.72 | 77.54 |
| KRH44390 | Soybean | nucleus | 76.72 | 74.36 |
| Solyc03g120380.2.1 | Tomato | nucleus | 66.14 | 65.1 |
| PGSC0003DMT400042572 | Potato | nucleus | 37.04 | 64.81 |
| VIT_09s0002g05150.t01 | Wine grape | cytosol, nucleus, plastid | 65.08 | 64.06 |
| PGSC0003DMT400006800 | Potato | mitochondrion | 65.61 | 63.59 |
| CDX75834 | Canola | cytosol, nucleus, plastid | 59.79 | 58.25 |
| AT3G15540.1 | Thale cress | nucleus | 60.32 | 57.87 |
| Bra001598.1-P | Field mustard | nucleus | 59.26 | 57.73 |
| Bra027232.1-P | Field mustard | nucleus | 59.26 | 57.73 |
| CDX82428 | Canola | cytosol, nucleus, plastid | 59.26 | 57.73 |
| Bra021117.1-P | Field mustard | cytosol, nucleus, plastid | 58.73 | 56.35 |
| CDY20135 | Canola | cytosol, nucleus, plastid | 58.73 | 56.35 |
| CDY21845 | Canola | cytosol, extracellular, nucleus | 58.2 | 55.84 |
| CDY26042 | Canola | nucleus | 57.67 | 55.61 |
| CDY68807 | Canola | nucleus | 57.14 | 55.1 |
| AT1G52830.1 | Thale cress | nucleus | 53.97 | 53.97 |
| KRH34375 | Soybean | cytosol, nucleus | 34.39 | 53.28 |
| Bra018993.1-P | Field mustard | nucleus | 57.14 | 53.2 |
| CDY71748 | Canola | cytosol, nucleus, plastid | 48.68 | 53.18 |
| CDY53800 | Canola | nucleus | 48.15 | 48.4 |
| KRH71338 | Soybean | nucleus | 48.15 | 45.05 |
| KRH32098 | Soybean | nucleus | 40.74 | 44.25 |
| KRH23505 | Soybean | nucleus | 41.27 | 42.62 |
| KRH69048 | Soybean | nucleus | 42.86 | 42.19 |
| KRH09810 | Soybean | nucleus | 41.27 | 41.27 |
| KRH67288 | Soybean | nucleus | 44.97 | 41.26 |
| KRG92430 | Soybean | nucleus | 42.33 | 41.24 |
| KRG95613 | Soybean | nucleus | 43.92 | 40.69 |
| KRG92683 | Soybean | nucleus | 47.09 | 39.21 |
| KRG96977 | Soybean | nucleus | 44.97 | 36.96 |
| KRH34377 | Soybean | nucleus | 46.03 | 36.4 |
| KRH68738 | Soybean | nucleus | 45.5 | 35.39 |
| KRH32099 | Soybean | nucleus | 46.03 | 35.08 |
| KRG95616 | Soybean | nucleus | 46.56 | 34.92 |
| KRH67289 | Soybean | nucleus | 46.56 | 34.65 |
| KRH34091 | Soybean | cytosol, nucleus, plastid | 41.27 | 33.77 |
| KRH74730 | Soybean | plastid | 28.57 | 33.54 |
| KRH71337 | Soybean | nucleus | 27.51 | 30.59 |
| KRH60250 | Soybean | nucleus | 46.03 | 30.31 |
| KRH39325 | Soybean | nucleus | 47.62 | 29.32 |
| KRH23426 | Soybean | nucleus | 47.62 | 29.32 |
| KRH09902 | Soybean | nucleus | 47.62 | 28.21 |
| KRH75635 | Soybean | nucleus | 46.03 | 27.53 |
| KRG92429 | Soybean | cytosol, nucleus, plastid | 48.15 | 27.49 |
| KRH44313 | Soybean | nucleus | 45.5 | 26.71 |
| KRH47242 | Soybean | nucleus | 44.97 | 26.65 |
| KRH62157 | Soybean | nucleus | 48.15 | 25.28 |
| KRH41538 | Soybean | golgi, plasma membrane | 47.09 | 24.93 |
| KRH39524 | Soybean | nucleus | 46.56 | 24.86 |
| KRH45470 | Soybean | nucleus | 46.03 | 24.86 |
| KRH16912 | Soybean | nucleus | 47.09 | 24.25 |
| KRH74432 | Soybean | nucleus | 46.03 | 24.23 |
| KRH72523 | Soybean | nucleus | 46.03 | 23.77 |
| KRH52867 | Soybean | nucleus | 45.5 | 23.63 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | EMBL:ACUP02008471 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | EnsemblPlantsGene:GLYMA_13G361100 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 |
| UniProt:I1M5N4 | InterPro:IPR000270 | EnsemblPlants:KRH23504 | ProteinID:KRH23504 | ProteinID:KRH23504.1 | InterPro:PB1_dom |
| PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF12 | SUPFAM:SSF54277 | UniParc:UPI0000E647A9 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:44811546..44814902
Molecular Weight (calculated)
21545.9 Da
IEP (calculated)
6.296
GRAVY (calculated)
-0.619
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKEAVGLEI TTELRLGLPG GELPDKNEKI KKRVFSEIQA HDDDENSSSE QDRKIQTKNQ VVGWPPVCSY RKKNTVNETK MYVKVSMDGA PFLRKIDLAM
101: HKGYSELVLA LEKFFGCYGI REALKDAENA EHVPIYEDKD GDWMLVGDVP WEMFIESCKR LRIMKRSDAK GFDLQPKGSL KGFIEGVTK
101: HKGYSELVLA LEKFFGCYGI REALKDAENA EHVPIYEDKD GDWMLVGDVP WEMFIESCKR LRIMKRSDAK GFDLQPKGSL KGFIEGVTK
001: MEKEGLGLEI TELRLGLPGR DVAEKMMKKR AFTEMNMTSS GSNSDQCESG VVSSGGDAEK VNDSPAAKSQ VVGWPPVCSY RKKNSCKEAS TTKVGLGYVK
101: VSMDGVPYLR KMDLGSSQGY DDLAFALDKL FGFRGIGVAL KDGDNCEYVT IYEDKDGDWM LAGDVPWGMF LESCKRLRIM KRSDATGFGL QPRGVDE
101: VSMDGVPYLR KMDLGSSQGY DDLAFALDKL FGFRGIGVAL KDGDNCEYVT IYEDKDGDWM LAGDVPWGMF LESCKRLRIM KRSDATGFGL QPRGVDE
Arabidopsis Description
IAA19Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:Q2VWA2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.