Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KRG89021 | nucleus |
| KRG91907 | nucleus |
| KRG96377 | nucleus |
| KRH02575 | nucleus, nucleus |
| KRH05923 | nucleus |
| KRH06451 | nucleus |
| KRH12587 | nucleus, nucleus |
| KRH17404 | nucleus |
| KRH19355 | nucleus, nucleus |
| KRH22924 | nucleus |
| KRH24914 | nucleus |
| KRH26391 | nucleus |
| KRH31921 | nucleus |
| KRH34867 | nucleus |
| KRH37536 | nucleus, nucleus |
| KRH47893 | nucleus |
| KRH68108 | nucleus |
| KRH68924 | nucleus |
| KRH71533 | nucleus |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH74432 | Soybean | nucleus | 95.2 | 93.87 |
| KRH75635 | Soybean | nucleus | 76.84 | 86.08 |
| KRH45470 | Soybean | nucleus | 81.36 | 82.29 |
| Bra030219.1-P | Field mustard | nucleus | 53.95 | 71.8 |
| CDY25617 | Canola | nucleus | 53.67 | 71.43 |
| CDX89499 | Canola | nucleus | 53.39 | 69.74 |
| KRH62157 | Soybean | nucleus | 66.38 | 65.28 |
| AT2G22670.4 | Thale cress | nucleus | 61.02 | 63.91 |
| KRH16912 | Soybean | nucleus | 64.97 | 62.67 |
| KRH34375 | Soybean | cytosol, nucleus | 21.47 | 62.3 |
| KRH72523 | Soybean | nucleus | 63.56 | 61.48 |
| KRH52867 | Soybean | nucleus | 62.71 | 60.99 |
| KRH74730 | Soybean | plastid | 26.55 | 58.39 |
| KRH60250 | Soybean | nucleus | 46.89 | 57.84 |
| KRH39325 | Soybean | nucleus | 48.59 | 56.03 |
| KRG92683 | Soybean | nucleus | 34.75 | 54.19 |
| KRH23426 | Soybean | nucleus | 46.61 | 53.75 |
| KRH68738 | Soybean | nucleus | 36.72 | 53.5 |
| KRH23505 | Soybean | nucleus | 27.12 | 52.46 |
| KRH09902 | Soybean | nucleus | 46.89 | 52.04 |
| KRG96977 | Soybean | nucleus | 33.62 | 51.74 |
| KRH34377 | Soybean | nucleus | 34.75 | 51.46 |
| KRH32099 | Soybean | nucleus | 35.59 | 50.81 |
| KRG92430 | Soybean | nucleus | 27.68 | 50.52 |
| KRH67288 | Soybean | nucleus | 29.1 | 50.0 |
| KRH69048 | Soybean | nucleus | 27.12 | 50.0 |
| KRH09810 | Soybean | nucleus | 26.55 | 49.74 |
| KRH67289 | Soybean | nucleus | 35.59 | 49.61 |
| KRG95616 | Soybean | nucleus | 35.03 | 49.21 |
| KRG95613 | Soybean | nucleus | 28.25 | 49.02 |
| KRH71338 | Soybean | nucleus | 27.97 | 49.01 |
| KRH09813 | Soybean | nucleus | 25.14 | 47.59 |
| KRH41538 | Soybean | golgi, plasma membrane | 47.74 | 47.34 |
| KRH44313 | Soybean | nucleus | 42.94 | 47.2 |
| KRH23504 | Soybean | nucleus | 24.86 | 46.56 |
| KRH32098 | Soybean | nucleus | 22.88 | 46.55 |
| KRH34091 | Soybean | cytosol, nucleus, plastid | 30.23 | 46.32 |
| KRH47242 | Soybean | nucleus | 41.53 | 46.08 |
| KRH47514 | Soybean | nucleus | 24.29 | 45.99 |
| KRH44390 | Soybean | nucleus | 24.58 | 44.62 |
| KRH71337 | Soybean | nucleus | 20.06 | 41.76 |
| KRG92429 | Soybean | cytosol, nucleus, plastid | 38.14 | 40.79 |
Protein Annotations
| EntrezGene:100785203 | Gene3D:3.10.20.90 | MapMan:35.1 | EMBL:ACUP02005938 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| EnsemblPlantsGene:GLYMA_09G203300 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 |
| GO:GO:0009987 | UniProt:I1L4V9 | InterPro:IPR000270 | EnsemblPlants:KRH39524 | ProteinID:KRH39524 | ProteinID:KRH39524.1 |
| InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF24 | SUPFAM:SSF54277 |
| UniParc:UPI00018CBD8C | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:42740381..42744735
Molecular Weight (calculated)
38063.1 Da
IEP (calculated)
7.287
GRAVY (calculated)
-0.496
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPPTLVTEE EGRSTVASDS SQSLDCFSQN GAGLKERNYL GLSDCSSVDS CASTVPSLCD EKKENMNLKA TELRLGLPGF QSPEREPDLF SLSSPKLDEK
101: PLFPLLPTKD GICSSGQKAV VSGNKRGFAD TMDGFSQGKF AGNTGMNAVL SPRPSGAQPS AMKETPSKLS ERPCSTNNGT GHNHTGASIS GSAPASKAQV
201: VGWPPIRSFR KNSMATTTNK NNDEVDGKPG VGALFVKVSM DGAPYLRKVD LRSYTTYQEL SSALEKMFLS CFTLGQCGSH GAPGREMLSE SKLRDLLHGS
301: EYVLTYEDKD GDWMLVGDVP WEMFIETCKR LKIMKGSDAI GLAPRAMEKS KSRI
101: PLFPLLPTKD GICSSGQKAV VSGNKRGFAD TMDGFSQGKF AGNTGMNAVL SPRPSGAQPS AMKETPSKLS ERPCSTNNGT GHNHTGASIS GSAPASKAQV
201: VGWPPIRSFR KNSMATTTNK NNDEVDGKPG VGALFVKVSM DGAPYLRKVD LRSYTTYQEL SSALEKMFLS CFTLGQCGSH GAPGREMLSE SKLRDLLHGS
301: EYVLTYEDKD GDWMLVGDVP WEMFIETCKR LKIMKGSDAI GLAPRAMEKS KSRI
001: MSPEEELQSN VSVASSSPTS NCISRNTLGG LKEHNYLGLS DCSSVGSSTL SPLAEDDKAT ISLKATELTL GLPGSQSPAR DTELNLLSPA KLDEKPFFPL
101: LPSKDEICSS SQKNNASGNK RGFSDTMDQF AEAKSSVYTE KNWMFPEAAA TQSVTKKDVP QNIPKGQSST TNNSSSPPAA KAQIVGWPPV RSYRKNTLAT
201: TCKNSDEVDG RPGSGALFVK VSMDGAPYLR KVDLRSYTNY GELSSALEKM FTTFTLGQCG SNGAAGKDML SETKLKDLLN GKDYVLTYED KDGDWMLVGD
301: VPWEMFIDVC KKLKIMKGCD AIGLAPRAME KSKMRA
101: LPSKDEICSS SQKNNASGNK RGFSDTMDQF AEAKSSVYTE KNWMFPEAAA TQSVTKKDVP QNIPKGQSST TNNSSSPPAA KAQIVGWPPV RSYRKNTLAT
201: TCKNSDEVDG RPGSGALFVK VSMDGAPYLR KVDLRSYTNY GELSSALEKM FTTFTLGQCG SNGAAGKDML SETKLKDLLN GKDYVLTYED KDGDWMLVGD
301: VPWEMFIDVC KKLKIMKGCD AIGLAPRAME KSKMRA
Arabidopsis Description
IAA9Auxin-responsive protein IAA9 [Source:UniProtKB/Swiss-Prot;Acc:Q38827]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.