Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KRG89021 | nucleus |
| KRG91907 | nucleus |
| KRG96377 | nucleus |
| KRH02575 | nucleus, nucleus |
| KRH05923 | nucleus |
| KRH06451 | nucleus |
| KRH12587 | nucleus, nucleus |
| KRH17404 | nucleus |
| KRH19355 | nucleus, nucleus |
| KRH22924 | nucleus |
| KRH24914 | nucleus |
| KRH26391 | nucleus |
| KRH31921 | nucleus |
| KRH34867 | nucleus |
| KRH37536 | nucleus, nucleus |
| KRH47893 | nucleus |
| KRH68108 | nucleus |
| KRH68924 | nucleus |
| KRH71533 | nucleus |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH45470 | Soybean | nucleus | 92.09 | 83.14 |
| KRH39524 | Soybean | nucleus | 86.08 | 76.84 |
| KRH74432 | Soybean | nucleus | 85.76 | 75.49 |
| CDY25617 | Canola | nucleus | 59.18 | 70.3 |
| Bra030219.1-P | Field mustard | nucleus | 58.86 | 69.92 |
| CDX89499 | Canola | nucleus | 58.23 | 67.9 |
| KRH34375 | Soybean | cytosol, nucleus | 24.68 | 63.93 |
| KRH62157 | Soybean | nucleus | 69.3 | 60.83 |
| AT2G22670.4 | Thale cress | nucleus | 63.92 | 59.76 |
| KRH72523 | Soybean | nucleus | 66.77 | 57.65 |
| KRH16912 | Soybean | nucleus | 66.77 | 57.49 |
| KRH52867 | Soybean | nucleus | 65.19 | 56.59 |
| KRH74730 | Soybean | plastid | 28.16 | 55.28 |
| KRH39325 | Soybean | nucleus | 52.22 | 53.75 |
| KRH60250 | Soybean | nucleus | 48.42 | 53.31 |
| KRG92683 | Soybean | nucleus | 37.66 | 52.42 |
| KRH23426 | Soybean | nucleus | 50.63 | 52.12 |
| KRH68738 | Soybean | nucleus | 39.87 | 51.85 |
| KRH71338 | Soybean | nucleus | 32.91 | 51.49 |
| KRH34377 | Soybean | nucleus | 38.61 | 51.05 |
| KRH69048 | Soybean | nucleus | 31.01 | 51.04 |
| KRG92430 | Soybean | nucleus | 31.33 | 51.03 |
| KRH09902 | Soybean | nucleus | 51.27 | 50.78 |
| KRG96977 | Soybean | nucleus | 36.71 | 50.43 |
| KRH23505 | Soybean | nucleus | 29.11 | 50.27 |
| KRH67288 | Soybean | nucleus | 31.65 | 48.54 |
| KRH67289 | Soybean | nucleus | 38.92 | 48.43 |
| KRH32098 | Soybean | nucleus | 26.58 | 48.28 |
| KRH09810 | Soybean | nucleus | 28.8 | 48.15 |
| KRG95613 | Soybean | nucleus | 31.01 | 48.04 |
| KRG95616 | Soybean | nucleus | 38.29 | 48.02 |
| KRH32099 | Soybean | nucleus | 37.34 | 47.58 |
| KRH09813 | Soybean | nucleus | 27.85 | 47.06 |
| KRH23504 | Soybean | nucleus | 27.53 | 46.03 |
| KRH47242 | Soybean | nucleus | 45.89 | 45.45 |
| KRH47514 | Soybean | nucleus | 26.9 | 45.45 |
| KRH44313 | Soybean | nucleus | 46.2 | 45.34 |
| KRH34091 | Soybean | cytosol, nucleus, plastid | 32.91 | 45.02 |
| KRH44390 | Soybean | nucleus | 27.22 | 44.1 |
| KRH41538 | Soybean | golgi, plasma membrane | 49.05 | 43.42 |
| KRG92429 | Soybean | cytosol, nucleus, plastid | 41.46 | 39.58 |
| KRH71337 | Soybean | nucleus | 21.2 | 39.41 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | EMBL:ACUP02000436 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | EnsemblPlantsGene:GLYMA_01G098000 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 |
| InterPro:IPR000270 | UniProt:K7K2W3 | EnsemblPlants:KRH75635 | ProteinID:KRH75635 | ProteinID:KRH75635.1 | InterPro:PB1_dom |
| PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF24 | SUPFAM:SSF54277 | UniParc:UPI0002961549 |
Description
hypothetical protein
Coordinates
chr1:-:32569597..32573264
Molecular Weight (calculated)
34166.5 Da
IEP (calculated)
6.057
GRAVY (calculated)
-0.398
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPPLLVTED EGQCHASMVA SASSPSLNCF SLNEAGFKEC NYLGLSDCSS VDSSTVPNLS DEKKENLNLK ATELRLGLPG SQSPERETEL FSLSSTKLDE
101: KPLFPLLPTK DGICSLSQKT VVSGNKRGFA DTMDPEVKTA NGTGHNHTSG ASISGSAPVA KAQVVGWPPI RSFRKNSLAT TSKNNDEVDG KPGAAALFVK
201: VSMDGAPYLR KVDLRNYTMY QELSSALEKM FSCFTLGQCG SHGAPGREML SESKLKDLLH GSEYVLTYED KDGDWMLVGD VPWDMFIDTC KRLKIMKGSD
301: AIGLAPRAME KSRSRC
101: KPLFPLLPTK DGICSLSQKT VVSGNKRGFA DTMDPEVKTA NGTGHNHTSG ASISGSAPVA KAQVVGWPPI RSFRKNSLAT TSKNNDEVDG KPGAAALFVK
201: VSMDGAPYLR KVDLRNYTMY QELSSALEKM FSCFTLGQCG SHGAPGREML SESKLKDLLH GSEYVLTYED KDGDWMLVGD VPWDMFIDTC KRLKIMKGSD
301: AIGLAPRAME KSRSRC
001: MSPEEELQSN VSVASSSPTS NCISRNTLGG LKEHNYLGLS DCSSVGSSTL SPLAEDDKAT ISLKATELTL GLPGSQSPAR DTELNLLSPA KLDEKPFFPL
101: LPSKDEICSS SQKNNASGNK RGFSDTMDQF AEAKSSVYTE KNWMFPEAAA TQSVTKKDVP QNIPKGQSST TNNSSSPPAA KAQIVGWPPV RSYRKNTLAT
201: TCKNSDEVDG RPGSGALFVK VSMDGAPYLR KVDLRSYTNY GELSSALEKM FTTFTLGQCG SNGAAGKDML SETKLKDLLN GKDYVLTYED KDGDWMLVGD
301: VPWEMFIDVC KKLKIMKGCD AIGLAPRAME KSKMRA
101: LPSKDEICSS SQKNNASGNK RGFSDTMDQF AEAKSSVYTE KNWMFPEAAA TQSVTKKDVP QNIPKGQSST TNNSSSPPAA KAQIVGWPPV RSYRKNTLAT
201: TCKNSDEVDG RPGSGALFVK VSMDGAPYLR KVDLRSYTNY GELSSALEKM FTTFTLGQCG SNGAAGKDML SETKLKDLLN GKDYVLTYED KDGDWMLVGD
301: VPWEMFIDVC KKLKIMKGCD AIGLAPRAME KSKMRA
Arabidopsis Description
IAA9Auxin-responsive protein IAA9 [Source:UniProtKB/Swiss-Prot;Acc:Q38827]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.