Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH60250 | Soybean | nucleus | 90.06 | 50.52 |
| KRH34375 | Soybean | cytosol, nucleus | 33.54 | 44.26 |
| KRH41538 | Soybean | golgi, plasma membrane | 92.55 | 41.74 |
| KRH39325 | Soybean | nucleus | 70.19 | 36.81 |
| GSMUA_Achr2P15340_001 | Banana | nucleus | 55.9 | 36.73 |
| KRH32098 | Soybean | nucleus | 39.13 | 36.21 |
| VIT_11s0016g03540.t01 | Wine grape | nucleus | 71.43 | 35.94 |
| TraesCS7A01G331100.1 | Wheat | nucleus | 52.17 | 35.0 |
| TraesCS7D01G339300.1 | Wheat | nucleus | 51.55 | 34.58 |
| CDY06836 | Canola | nucleus | 53.42 | 34.13 |
| TraesCS7B01G242800.1 | Wheat | nucleus | 51.55 | 34.02 |
| GSMUA_Achr10P... | Banana | nucleus | 58.39 | 33.81 |
| GSMUA_Achr7P10930_001 | Banana | nucleus | 55.9 | 33.71 |
| EER89802 | Sorghum | cytosol | 51.55 | 33.33 |
| PGSC0003DMT400001013 | Potato | nucleus | 57.76 | 33.33 |
| GSMUA_Achr9P06290_001 | Banana | nucleus | 56.52 | 33.21 |
| GSMUA_Achr10P... | Banana | nucleus | 57.14 | 33.09 |
| Os06t0335500-01 | Rice | nucleus | 53.42 | 32.33 |
| GSMUA_Achr2P09210_001 | Banana | nucleus | 49.69 | 32.26 |
| KRH71338 | Soybean | nucleus | 40.37 | 32.18 |
| GSMUA_Achr10P... | Banana | nucleus | 57.76 | 31.85 |
| KRH23426 | Soybean | nucleus | 60.25 | 31.6 |
| HORVU3Hr1G031460.1 | Barley | cytosol | 44.72 | 31.3 |
| KRG92683 | Soybean | nucleus | 44.1 | 31.28 |
| Solyc12g007230.1.1 | Tomato | nucleus | 57.14 | 31.19 |
| HORVU0Hr1G021630.1 | Barley | cytosol, mitochondrion, nucleus | 35.4 | 30.98 |
| KRH34377 | Soybean | nucleus | 45.96 | 30.96 |
| GSMUA_Achr6P26730_001 | Banana | nucleus | 53.42 | 30.82 |
| Zm00001d037774_P001 | Maize | cytosol | 45.96 | 30.33 |
| KRH09902 | Soybean | nucleus | 59.63 | 30.09 |
| KRH23505 | Soybean | nucleus | 34.16 | 30.05 |
| Bra011082.1-P | Field mustard | nucleus | 54.04 | 30.0 |
| Os05t0230700-01 | Rice | nucleus | 47.83 | 29.96 |
| KRH34091 | Soybean | cytosol, nucleus, plastid | 42.86 | 29.87 |
| AT4G29080.1 | Thale cress | nucleus | 56.52 | 29.84 |
| KRH68738 | Soybean | nucleus | 44.72 | 29.63 |
| KRH32099 | Soybean | nucleus | 45.34 | 29.44 |
| KRH47514 | Soybean | nucleus | 34.16 | 29.41 |
| KRH09813 | Soybean | nucleus | 34.16 | 29.41 |
| OQU77659 | Sorghum | nucleus | 45.34 | 29.32 |
| KRG96977 | Soybean | nucleus | 41.61 | 29.13 |
| TraesCS1B01G418400.1 | Wheat | nucleus | 44.1 | 28.98 |
| KRG95613 | Soybean | nucleus | 36.65 | 28.92 |
| KRG92430 | Soybean | nucleus | 34.78 | 28.87 |
| GSMUA_Achr3P03400_001 | Banana | nucleus | 55.9 | 28.85 |
| KRH44390 | Soybean | nucleus | 34.78 | 28.72 |
| KRH69048 | Soybean | nucleus | 34.16 | 28.65 |
| KRH09810 | Soybean | nucleus | 33.54 | 28.57 |
| KRH23504 | Soybean | nucleus | 33.54 | 28.57 |
| KRH67289 | Soybean | nucleus | 44.72 | 28.35 |
| KRG95616 | Soybean | nucleus | 44.1 | 28.17 |
| KRH75635 | Soybean | nucleus | 55.28 | 28.16 |
| KRH67288 | Soybean | nucleus | 35.4 | 27.67 |
| TraesCS3B01G181500.1 | Wheat | cytosol | 40.99 | 26.94 |
| KRH44313 | Soybean | nucleus | 53.42 | 26.71 |
| Os01t0231000-01 | Rice | nucleus | 43.48 | 26.62 |
| HORVU3Hr1G088810.1 | Barley | plastid | 39.13 | 26.58 |
| KRH39524 | Soybean | nucleus | 58.39 | 26.55 |
| KRH71337 | Soybean | nucleus | 27.95 | 26.47 |
| TraesCS1A01G390200.1 | Wheat | plastid | 42.86 | 26.44 |
| KRH74432 | Soybean | nucleus | 58.39 | 26.18 |
| TraesCS1D01G398400.1 | Wheat | nucleus | 42.86 | 26.14 |
| KRH47242 | Soybean | nucleus | 51.55 | 26.02 |
| TraesCS3A01G155200.1 | Wheat | cytosol | 39.13 | 25.71 |
| KRH45470 | Soybean | nucleus | 55.9 | 25.71 |
| Os05t0559400-01 | Rice | nucleus | 44.72 | 25.62 |
| KRH62157 | Soybean | nucleus | 56.52 | 25.28 |
| TraesCS3B01G303900.1 | Wheat | nucleus, plastid | 39.75 | 25.0 |
| HORVU3Hr1G062160.2 | Barley | nucleus, plastid | 40.37 | 25.0 |
| Zm00001d038980_P001 | Maize | cytosol, nucleus, plastid | 44.72 | 24.91 |
| Zm00001d009532_P001 | Maize | nucleus | 43.48 | 24.91 |
| TraesCS3D01G162700.1 | Wheat | cytosol | 36.65 | 24.89 |
| Os01t0675700-01 | Rice | nucleus | 41.61 | 24.72 |
| TraesCS3D01G269700.1 | Wheat | nucleus, plastid | 39.75 | 24.71 |
| Zm00001d043878_P001 | Maize | nucleus, plastid | 40.99 | 24.54 |
| TraesCS3A01G270000.1 | Wheat | nucleus, plastid | 39.75 | 24.52 |
| KXG22521 | Sorghum | nucleus | 42.24 | 24.37 |
| KXG33104 | Sorghum | nucleus, plastid | 40.99 | 23.83 |
| KRH72523 | Soybean | nucleus | 54.04 | 23.77 |
| KRH16912 | Soybean | nucleus | 52.8 | 23.16 |
| KRG92429 | Soybean | cytosol, nucleus, plastid | 45.34 | 22.05 |
| HORVU1Hr1G086070.6 | Barley | plastid | 42.24 | 21.73 |
| KRH52867 | Soybean | nucleus | 48.45 | 21.43 |
| Zm00001d010411_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 40.99 | 20.06 |
| Zm00001d011588_P003 | Maize | nucleus, plastid | 39.13 | 18.48 |
| Zm00001d024008_P001 | Maize | mitochondrion | 39.75 | 18.39 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | UniProt:A0A0R0L673 | EMBL:ACUP02000066 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| EnsemblPlantsGene:GLYMA_01G039300 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 |
| GO:GO:0009987 | InterPro:IPR000270 | EnsemblPlants:KRH74730 | ProteinID:KRH74730 | ProteinID:KRH74730.1 | InterPro:PB1_dom |
| PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF39 | SUPFAM:SSF54277 | UniParc:UPI0006EE0672 |
Description
hypothetical protein
Coordinates
chr1:-:4256747..4258161
Molecular Weight (calculated)
17875.3 Da
IEP (calculated)
7.943
GRAVY (calculated)
-0.349
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: CTNQPTALGA SVLRETIPHS PKPLHENKPQ ISVATAKAQV VGWPPIRSFR KNSMASQPQK NDVAANAEAK SGCLYVKVNM EGSPYLRKVD LNSFTTYKDL
101: SLALEKMFSC FTLSQCGSYG VSSRENLSES RLMDLLHGSK YVLIYEDKDG DWMLVGDVLW E
101: SLALEKMFSC FTLSQCGSYG VSSRENLSES RLMDLLHGSK YVLIYEDKDG DWMLVGDVLW E
001: MSYRLLSVDK DELVTSPCLK ERNYLGLSDC SSVDSSTIPN VVGKSNLNFK ATELRLGLPE SQSPERETDF GLLSPRTPDE KLLFPLLPSK DNGSATTGHK
101: NVVSGNKRGF ADTWDEFSGV KGSVRPGGGI NMMLSPKVKD VSKSIQEERS HAKGGLNNAP AAKAQVVGWP PIRSYRKNTM ASSTSKNTDE VDGKPGLGVL
201: FVKVSMDGAP YLRKVDLRTY TSYQQLSSAL EKMFSCFTLG QCGLHGAQGR ERMSEIKLKD LLHGSEFVLT YEDKDGDWML VGDVPWEIFT ETCQKLKIMK
301: GSDSIGLAPG AVEKSKNKER V
101: NVVSGNKRGF ADTWDEFSGV KGSVRPGGGI NMMLSPKVKD VSKSIQEERS HAKGGLNNAP AAKAQVVGWP PIRSYRKNTM ASSTSKNTDE VDGKPGLGVL
201: FVKVSMDGAP YLRKVDLRTY TSYQQLSSAL EKMFSCFTLG QCGLHGAQGR ERMSEIKLKD LLHGSEFVLT YEDKDGDWML VGDVPWEIFT ETCQKLKIMK
301: GSDSIGLAPG AVEKSKNKER V
Arabidopsis Description
IAA8Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:F4IKE6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.