Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- nucleus 4
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG96613 | Soybean | plastid | 93.89 | 95.48 |
| KRH33660 | Soybean | plastid | 73.89 | 75.14 |
| KRH69143 | Soybean | plastid | 73.33 | 73.33 |
| VIT_07s0005g02550.t01 | Wine grape | plastid | 55.0 | 56.57 |
| GSMUA_Achr8P29850_001 | Banana | nucleus | 47.22 | 48.3 |
| Os01t0286900-01 | Rice | nucleus | 29.44 | 46.09 |
| AT3G62100.1 | Thale cress | plastid | 43.89 | 45.93 |
| AT2G46990.1 | Thale cress | plastid | 44.44 | 45.71 |
| CDY25089 | Canola | plastid | 43.89 | 45.66 |
| CDY27511 | Canola | cytosol, plastid | 43.89 | 45.4 |
| CDY48005 | Canola | cytosol, plastid | 43.89 | 45.4 |
| Bra040476.1-P | Field mustard | cytosol, plastid | 43.89 | 45.4 |
| Bra003484.1-P | Field mustard | nucleus, plastid | 43.33 | 45.35 |
| CDX67874 | Canola | plastid | 43.33 | 45.09 |
| GSMUA_Achr9P16800_001 | Banana | nucleus | 43.33 | 44.83 |
| CDY58757 | Canola | plastid | 41.67 | 43.6 |
| CDY11402 | Canola | plastid | 42.22 | 42.94 |
| Bra007661.1-P | Field mustard | plastid | 42.22 | 42.94 |
| Bra014411.1-P | Field mustard | nucleus, plastid | 28.89 | 41.27 |
| EES00605 | Sorghum | nucleus, plastid | 40.0 | 37.31 |
| Zm00001d040541_P001 | Maize | nucleus, plastid | 36.11 | 35.91 |
| KRH19441 | Soybean | endoplasmic reticulum, vacuole | 48.33 | 35.66 |
| Os02t0723400-02 | Rice | nucleus | 39.44 | 34.63 |
| KRH02508 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 49.44 | 34.23 |
| TraesCS1D01G084100.1 | Wheat | nucleus, plastid | 38.89 | 33.82 |
| TraesCS1B01G100300.1 | Wheat | plastid | 38.89 | 29.54 |
| Zm00001d008201_P001 | Maize | cytosol | 21.11 | 29.23 |
| TraesCS1A01G082700.2 | Wheat | plastid | 39.44 | 27.0 |
| HORVU1Hr1G017770.6 | Barley | cytosol, mitochondrion, vacuole | 29.44 | 25.6 |
| KRH67461 | Soybean | nucleus | 31.67 | 23.27 |
| KRH19625 | Soybean | nucleus | 34.44 | 21.31 |
| KRH32251 | Soybean | nucleus | 33.89 | 21.25 |
| KRG95739 | Soybean | nucleus | 30.0 | 20.07 |
| KRH20139 | Soybean | nucleus | 20.0 | 17.48 |
| KRH03666 | Soybean | cytosol | 18.89 | 17.09 |
| KRH09948 | Soybean | nucleus | 28.89 | 16.25 |
| KRH44271 | Soybean | nucleus | 27.78 | 15.97 |
| KRH52428 | Soybean | nucleus | 20.0 | 15.86 |
| KRH61758 | Soybean | nucleus | 19.44 | 15.49 |
| KRH47203 | Soybean | nucleus | 27.22 | 15.46 |
| KRH23388 | Soybean | nucleus | 28.89 | 15.03 |
Protein Annotations
| EntrezGene:100818376 | Gene3D:3.10.20.90 | MapMan:35.1 | EMBL:ACUP02002107 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| EnsemblPlantsGene:GLYMA_03G224800 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 |
| GO:GO:0009987 | UniProt:I1JQX8 | InterPro:IPR000270 | EnsemblPlants:KRH68346 | ProteinID:KRH68346 | ProteinID:KRH68346.1 |
| InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF15 | SUPFAM:SSF54277 |
| UniParc:UPI000187716C | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:42714678..42716205
Molecular Weight (calculated)
19952.6 Da
IEP (calculated)
6.387
GRAVY (calculated)
-0.254
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKPASSSSS SISSTTNRRL LISTASSLTQ QLPTDLRLGL GISATQHVAS SISRGQWQQP HHPFVNNNYS QAAASAEVND CSNDHSSFFV KVYMEGIPIG
101: RKLNILAHGG YYELVRTLEH MFDTTILWGT EMNGVQPERC HVLTYEDEEG DLVMVGDVPW EMFLSTVKRL KITRVDTFGC
101: RKLNILAHGG YYELVRTLEH MFDTTILWGT EMNGVQPERC HVLTYEDEEG DLVMVGDVPW EMFLSTVKRL KITRVDTFGC
001: MGRGRSSSSS SIESSSKSNP FGASSSTRNL STDLRLGLSF GTSSGTQYFN GGYGYSVAAP AVEDAEYVAA VEEEEENECN SVGSFYVKVN MEGVPIGRKI
101: DLMSLNGYRD LIRTLDFMFN ASILWAEEED MCNEKSHVLT YADKEGDWMM VGDVPWEMFL STVRRLKISR ANYHY
101: DLMSLNGYRD LIRTLDFMFN ASILWAEEED MCNEKSHVLT YADKEGDWMM VGDVPWEMFL STVRRLKISR ANYHY
Arabidopsis Description
IAA20Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A178W181]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.