Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH03666 | Soybean | cytosol | 79.13 | 81.91 |
| TraesCS7D01G128200.1 | Wheat | cytosol, mitochondrion | 23.3 | 47.06 |
| TraesCS7A01G129000.1 | Wheat | nucleus | 17.96 | 45.12 |
| PGSC0003DMT400079375 | Potato | cytosol | 41.26 | 42.08 |
| Solyc07g008020.2.1 | Tomato | cytosol | 39.32 | 41.33 |
| VIT_11s0016g05640.t01 | Wine grape | cytosol | 33.5 | 37.5 |
| TraesCS7D01G128100.1 | Wheat | nucleus | 28.16 | 36.25 |
| GSMUA_Achr9P26900_001 | Banana | plastid | 20.87 | 36.13 |
| TraesCS7D01G127900.1 | Wheat | nucleus | 26.21 | 36.0 |
| TraesCS7D01G127800.1 | Wheat | cytosol | 26.21 | 34.18 |
| HORVU7Hr1G026970.2 | Barley | cytosol | 27.67 | 33.93 |
| TraesCS7B01G029000.1 | Wheat | cytosol | 28.16 | 33.72 |
| GSMUA_Achr9P26910_001 | Banana | nucleus | 23.3 | 33.1 |
| TraesCS7B01G029100.1 | Wheat | nucleus | 27.67 | 32.2 |
| HORVU6Hr1G088140.2 | Barley | cytosol, mitochondrion, nucleus | 25.24 | 29.89 |
| Os02t0805100-01 | Rice | nucleus | 26.21 | 29.67 |
| TraesCS6D01G357500.1 | Wheat | cytosol, mitochondrion, nucleus | 24.76 | 29.65 |
| KXG31308 | Sorghum | cytosol | 28.16 | 29.44 |
| KXG19391 | Sorghum | nucleus | 29.13 | 29.41 |
| TraesCS6A01G373300.1 | Wheat | cytosol, nucleus, plastid | 24.76 | 29.14 |
| Zm00001d000288_P001 | Maize | cytosol | 27.18 | 28.43 |
| Os06t0166500-01 | Rice | nucleus | 25.24 | 28.42 |
| KRH61758 | Soybean | nucleus | 31.07 | 28.32 |
| TraesCS6B01G411000.1 | Wheat | cytosol, mitochondrion, nucleus | 24.27 | 28.25 |
| KRH52428 | Soybean | nucleus | 31.07 | 28.19 |
| Zm00001d018414_P001 | Maize | nucleus | 28.16 | 28.16 |
| Zm00001d045203_P001 | Maize | cytosol | 29.13 | 27.78 |
| KRH67461 | Soybean | nucleus | 28.64 | 24.08 |
| KRH33660 | Soybean | plastid | 18.93 | 22.03 |
| KRH19625 | Soybean | nucleus | 31.07 | 21.99 |
| KRH32251 | Soybean | nucleus | 30.58 | 21.95 |
| KRH69143 | Soybean | plastid | 18.45 | 21.11 |
| KRG96613 | Soybean | plastid | 17.48 | 20.34 |
| KRH68346 | Soybean | plastid | 17.48 | 20.0 |
| KRG95739 | Soybean | nucleus | 25.73 | 19.7 |
| KRH19441 | Soybean | endoplasmic reticulum, vacuole | 21.84 | 18.44 |
| KRH09948 | Soybean | nucleus | 26.7 | 17.19 |
| KRH02508 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 21.36 | 16.92 |
| KRH47203 | Soybean | nucleus | 25.24 | 16.4 |
| KRH44271 | Soybean | nucleus | 23.79 | 15.65 |
| KRH23388 | Soybean | nucleus | 26.21 | 15.61 |
Protein Annotations
| EntrezGene:100808466 | Gene3D:3.10.20.90 | MapMan:35.1 | EMBL:ACUP02008241 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| EnsemblPlantsGene:GLYMA_13G159000 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 |
| GO:GO:0009987 | UniProt:I1LZQ2 | InterPro:IPR000270 | EnsemblPlants:KRH20139 | ProteinID:KRH20139 | ProteinID:KRH20139.1 |
| InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF38 | SUPFAM:SSF54277 |
| UniParc:UPI000233B22D | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:27424532..27425894
Molecular Weight (calculated)
23844.6 Da
IEP (calculated)
7.569
GRAVY (calculated)
-0.586
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MELQLGLALS THSRAYDQPF SHKKRTFSQL MMMEHAPPPH HVMLPTLSLL PLTPSHHVVD DHHSQCSNIT KDEEEEGVVG WPPVNHWRKK LHVEEVVGNN
101: NNIDHMVWVD HRQTHSLQGY SSNTLYVKVK MEGVGIARKV DLSMHQSFHT LKETLMDMFG KCHHQQSNNY ELAYLDKEGD WLLAQDVPWR SFVGCARRLK
201: LVKTSR
101: NNIDHMVWVD HRQTHSLQGY SSNTLYVKVK MEGVGIARKV DLSMHQSFHT LKETLMDMFG KCHHQQSNNY ELAYLDKEGD WLLAQDVPWR SFVGCARRLK
201: LVKTSR
001: MRGVSELEVG KSNLPAESEL ELGLGLSLGG GAWKERGRIL TAKDFPSVGS KRSAESSSHQ GASPPRSSQV VGWPPIGLHR MNSLVNNQAM KAARAEEGDG
101: EKKVVKNDEL KDVSMKVNPK VQGLGFVKVN MDGVGIGRKV DMRAHSSYEN LAQTLEEMFF GMTGTTCREK VKPLRLLDGS SDFVLTYEDK EGDWMLVGDV
201: PWRMFINSVK RLRIMGTSEA SGLAPRRQEQ KDRQRNNPV
101: EKKVVKNDEL KDVSMKVNPK VQGLGFVKVN MDGVGIGRKV DMRAHSSYEN LAQTLEEMFF GMTGTTCREK VKPLRLLDGS SDFVLTYEDK EGDWMLVGDV
201: PWRMFINSVK RLRIMGTSEA SGLAPRRQEQ KDRQRNNPV
Arabidopsis Description
IAA12Auxin-responsive protein IAA12 [Source:UniProtKB/Swiss-Prot;Acc:Q38830]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.