Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os04t0653300-00 | |
| Os06t0196700-02 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G32280.1 | Os06t0196700-02 | AT1G19220.1 | 21734647 |
| AT4G32280.1 | Os06t0196700-02 | AT5G20730.1 | 21734647 |
| AT4G32280.1 | Os04t0653300-00 | AT5G57420.1 | 21734647 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG31308 | Sorghum | cytosol | 65.93 | 60.91 |
| HORVU6Hr1G088140.2 | Barley | cytosol, mitochondrion, nucleus | 57.69 | 60.34 |
| Zm00001d018414_P001 | Maize | nucleus | 65.93 | 58.25 |
| TraesCS6A01G373300.1 | Wheat | cytosol, nucleus, plastid | 54.4 | 56.57 |
| TraesCS6D01G357500.1 | Wheat | cytosol, mitochondrion, nucleus | 53.3 | 56.4 |
| TraesCS6B01G411000.1 | Wheat | cytosol, mitochondrion, nucleus | 53.85 | 55.37 |
| GSMUA_Achr9P26900_001 | Banana | plastid | 32.42 | 49.58 |
| GSMUA_Achr9P26910_001 | Banana | nucleus | 36.26 | 45.52 |
| Os06t0166500-01 | Rice | nucleus | 45.05 | 44.81 |
| PGSC0003DMT400052767 | Potato | cytosol, extracellular, nucleus | 19.23 | 38.46 |
| Os01t0286900-01 | Rice | nucleus | 22.53 | 35.65 |
| PGSC0003DMT400079375 | Potato | cytosol | 31.87 | 28.71 |
| VIT_04s0008g05560.t01 | Wine grape | extracellular | 35.71 | 28.63 |
| Solyc07g008020.2.1 | Tomato | cytosol | 30.77 | 28.57 |
| KRH20139 | Soybean | nucleus | 29.67 | 26.21 |
| PGSC0003DMT400035770 | Potato | cytosol | 31.32 | 26.03 |
| KRH03666 | Soybean | cytosol | 28.02 | 25.63 |
| Solyc06g066020.2.1 | Tomato | cytoskeleton, cytosol, nucleus | 33.52 | 25.21 |
| KRH52428 | Soybean | nucleus | 31.32 | 25.11 |
| Solyc08g021820.2.1 | Tomato | nucleus | 31.32 | 25.11 |
| VIT_11s0016g05640.t01 | Wine grape | cytosol | 24.73 | 24.46 |
| KRH61758 | Soybean | nucleus | 30.22 | 24.34 |
| Bra011332.1-P | Field mustard | nucleus | 28.02 | 22.08 |
| CDX75231 | Canola | nucleus | 28.02 | 22.08 |
| Os08t0109400-01 | Rice | nucleus | 29.67 | 21.95 |
| Os01t0190300-01 | Rice | nucleus | 28.57 | 21.85 |
| Os02t0817600-02 | Rice | nucleus | 33.52 | 21.71 |
| AT4G32280.1 | Thale cress | cytosol | 29.67 | 21.51 |
| CDX68829 | Canola | nucleus | 26.92 | 21.49 |
| Os02t0723400-02 | Rice | nucleus | 24.18 | 21.46 |
| CDY13478 | Canola | nucleus | 28.57 | 21.4 |
| Bra023958.1-P | Field mustard | nucleus | 28.57 | 21.4 |
| CDX72351 | Canola | nucleus | 28.57 | 21.05 |
| Os02t0228900-01 | Rice | nucleus | 26.92 | 16.33 |
| Os01t0741900-01 | Rice | nucleus | 25.82 | 14.03 |
| Os05t0523300-01 | Rice | nucleus | 24.73 | 13.76 |
| Os11t0221000-01 | Rice | nucleus | 15.38 | 9.72 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | EntrezGene:4331061 | ProteinID:AAK98708.1 | EMBL:AK073365 | InterPro:AUX/IAA_dom |
| InterPro:AUX_IAA | ProteinID:BAD19421.1 | ProteinID:BAF10351.1 | ProteinID:BAS81456.1 | ProteinID:EAZ24996.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009734 | GO:GO:0009987 |
| InterPro:IPR000270 | EnsemblPlantsGene:Os02g0805100 | EnsemblPlants:Os02t0805100-01 | InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 |
| PANTHER:PTHR31734 | PANTHER:PTHR31734:SF88 | UniProt:Q6K846 | SUPFAM:SSF54277 | UniParc:UPI00000A9E97 | RefSeq:XP_015627246.1 |
| SEG:seg | : | : | : | : | : |
Description
IAA9Similar to Auxin-responsive protein IAA12 (Indoleacetic acid-induced protein 12) (BODENLOS protein). (Os02t0805100-01)
Coordinates
chr2:+:34348582..34349843
Molecular Weight (calculated)
19348.5 Da
IEP (calculated)
5.062
GRAVY (calculated)
-0.483
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MELELGLAPP NSGHLVVDEL SSSSSSGGGS GSAPVSASSA GKRGFREAFQ ETLLLFDDGS CCNTSDDDCR RRKKTVVGWP PVSSARRACG GANYVKVKKE
101: GDAIGRKVDL ALHSSYDELA ATLARMFPTN DHQGEKKMAN DDHGDAAGPV VTYEDGDGDW MLVGDVPWDD FARSVKRLKI LG
101: GDAIGRKVDL ALHSSYDELA ATLARMFPTN DHQGEKKMAN DDHGDAAGPV VTYEDGDGDW MLVGDVPWDD FARSVKRLKI LG
001: MAYEKVNELN LKDTELCLGL PGRTEKIKEE QEVSCVKSNN KRLFEETRDE EESTPPTKTQ IVGWPPVRSS RKNNNSVSYV KVSMDGAPYL RKIDLKTYKN
101: YPELLKALEN MFKVMIGEYC EREGYKGSGF VPTYEDKDGD WMLVGDVPWD MFSSSCKRLR IMKGSDAPAL DSSL
101: YPELLKALEN MFKVMIGEYC EREGYKGSGF VPTYEDKDGD WMLVGDVPWD MFSSSCKRLR IMKGSDAPAL DSSL
Arabidopsis Description
IAA2Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ54]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.