Factsheet for Os02t0817600-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G432800.1	Wheat	nucleus	75.8	76.9
TraesCS6A01G392600.3	Wheat	cytosol, nucleus, plastid	76.16	75.09
HORVU6Hr1G091260.3	Barley	nucleus	73.67	73.67
KXG31359	Sorghum	cytosol, nucleus, peroxisome	77.58	73.65
TraesCS6D01G378300.1	Wheat	cytosol, nucleus, plastid	73.67	73.14
Zm00001d051911_P002	Maize	nucleus	75.44	72.11
GSMUA_Achr11P...	Banana	nucleus	44.84	42.0
Os01t0286900-01	Rice	nucleus	15.3	37.39
Os02t0805100-01	Rice	nucleus	21.71	33.52
Os06t0166500-01	Rice	nucleus	19.93	30.6
Os01t0190300-01	Rice	nucleus	22.78	26.89
Os02t0723400-02	Rice	nucleus	19.22	26.34
Os02t0228900-01	Rice	nucleus	28.11	26.33
Os08t0109400-01	Rice	nucleus	22.78	26.02
Os05t0523300-01	Rice	nucleus	27.05	23.24
Os01t0741900-01	Rice	nucleus	24.91	20.9
Os11t0221000-01	Rice	nucleus	14.23	13.89

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.1	EntrezGene:4331149	EMBL:AK069892	EMBL:AK104501	InterPro:AUX/IAA_dom
InterPro:AUX_IAA	ProteinID:BAD21523.1	ProteinID:BAD21524.1	ProteinID:BAD22024.1	ProteinID:BAD22025.1	ProteinID:BAF10436.1
ProteinID:BAS81587.1	ProteinID:BAS81588.1	ProteinID:EEE58047.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009719	GO:GO:0009734	GO:GO:0009987	InterPro:IPR000270	EnsemblPlantsGene:Os02g0817600	EnsemblPlants:Os02t0817600-02
InterPro:PB1_dom	PFAM:PF02309	PFscan:PS51745	PANTHER:PTHR31734	PANTHER:PTHR31734:SF6	UniProt:Q0DWF2
SUPFAM:SSF54277	UniParc:UPI0000377C18	RefSeq:XP_015626382.1	RefSeq:XP_015626383.1	SEG:seg	:

Description

IAA10AUX/IAA protein family protein. (Os02t0817600-01);Similar to Auxin-responsive protein IAA10. (Os02t0817600-02);AUX/IAA protein family protein. (Os02t0817600-03)

Coordinates

chr2:-:35073455..35075763

Molecular Weight (calculated)

30127.1 Da

IEP (calculated)

6.263

GRAVY (calculated)

-0.638

Length

281 amino acids

Sequence
(BLAST)

001: MRGGVAGPTA GEPPGTEAEA EEVEESSAGD DEELELGLSL GSKKQQQQQH APCRILTARD LQPAAALSPD SSVSSSSPAA AAAAGGKRAE GPTATTSPGT
101: VASGHPHSSF GVVGWPPIRQ FRMNSLFNQA KENTSETDTK KTATNESDVQ KDKEEGEKKG RVAGWVKVNM DGEVIGRKVD LNAHRSYKTL ALALELMFTK
201: PSIGLCASHN TNSLKLLDNS AEYQLTYEDR DGDWMLVGDV PWEMFVSSVK RLRIMRTSDA NGLGQRYQGI HRTIASTRGR S

Best Arabidopsis Sequence Match ( AT2G33310.2 )
(BLAST)

001: MITELEMGKG ESELELGLGL SLGGGTAAKI GKSGGGGAWG ERGRLLTAKD FPSVGSKRAA DSASHAGSSP PRSSSQVVGW PPIGSHRMNS LVNNQATKSA
101: REEEEAGKKK VKDDEPKDVT KKVNGKVQVG FIKVNMDGVA IGRKVDLNAH SSYENLAQTL EDMFFRTNPG TVGLTSQFTK PLRLLDGSSE FVLTYEDKEG
201: DWMLVGDVPW RMFINSVKRL RVMKTSEANG LAARNQEPNE RQRKQPV

Arabidopsis Description

IAA13Auxin-responsive protein IAA13 [Source:UniProtKB/Swiss-Prot;Acc:Q38831]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.