CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

nucleus 3
mitochondrion 1
endoplasmic reticulum 2
extracellular 2
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19441	Soybean	endoplasmic reticulum, vacuole	86.15	91.8
VIT_05s0020g01070.t01	Wine grape	plastid	45.77	60.1
GSMUA_Achr8P29850_001	Banana	nucleus	38.46	56.82
GSMUA_Achr9P16800_001	Banana	nucleus	35.38	52.87
KRH33660	Soybean	plastid	35.38	51.98
KRH69143	Soybean	plastid	35.77	51.67
Os01t0286900-01	Rice	nucleus	22.69	51.3
KRG96613	Soybean	plastid	34.23	50.28
KRH68346	Soybean	plastid	34.23	49.44
EES00605	Sorghum	nucleus, plastid	36.54	49.22
Zm00001d040541_P001	Maize	nucleus, plastid	30.77	44.2
Os02t0723400-02	Rice	nucleus	32.69	41.46
TraesCS1D01G084100.1	Wheat	nucleus, plastid	31.15	39.13
TraesCS1B01G100300.1	Wheat	plastid	30.77	33.76
Zm00001d008201_P001	Maize	cytosol	16.54	33.08
TraesCS1A01G082700.2	Wheat	plastid	32.69	32.32
HORVU1Hr1G017770.6	Barley	cytosol, mitochondrion, vacuole	23.46	29.47
KRH67461	Soybean	nucleus	24.62	26.12
KRH19625	Soybean	nucleus	25.77	23.02
KRH32251	Soybean	nucleus	25.38	23.0
KRG95739	Soybean	nucleus	22.31	21.56
KRH20139	Soybean	nucleus	16.92	21.36
KRH03666	Soybean	cytosol	15.77	20.6
KRH52428	Soybean	nucleus	17.69	20.26
KRH61758	Soybean	nucleus	16.92	19.47
KRH09948	Soybean	nucleus	20.77	16.88
KRH44271	Soybean	nucleus	18.85	15.65
KRH23388	Soybean	nucleus	20.77	15.61
KRH47203	Soybean	nucleus	18.46	15.14

Protein Annotations

EntrezGene:100527448	Gene3D:3.10.20.90	MapMan:35.1	EMBL:ACUP02010309	InterPro:AUX/IAA_dom	InterPro:AUX_IAA
EnsemblPlantsGene:GLYMA_17G042800	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009734
GO:GO:0009987	UniProt:I1MS06	InterPro:IPR000270	EnsemblPlants:KRH02508	ProteinID:KRH02508	ProteinID:KRH02508.1
InterPro:PB1_dom	PFAM:PF02309	PFscan:PS51745	PANTHER:PTHR31734	PANTHER:PTHR31734:SF3	SUPFAM:SSF54277
TMHMM:TMhelix	UniParc:UPI00023D4FAD	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:3180124..3182275

Molecular Weight (calculated)

29298.0 Da

IEP (calculated)

7.701

GRAVY (calculated)

-0.253

Length

260 amino acids

Sequence
(BLAST)

001: MSPTLMANQN QRECAECLTW LCFLLITLSL SFFLFCFKVA SVVCIYKEPK VAAFLFSLDQ FHSLEDMGTL EQIDAPQTQS SSSSSSSIDS NNNPSRTRTP
101: PSSSPSSSLC RNRTDLSTDL RLGLSISPSS QSESPFNSTR REESFDWPPI KSILRSTLVG KQSYLSQRPS LFVKVYMEGI PIGRKLNLMA HYGYDGLVKT
201: LGHMFRTNIL CPNSQPLNSG NFHVLTYEDQ EGDWMMVGDV PWEMFLNSVK RLKITRADRC

Best Arabidopsis Sequence Match ( AT3G17600.1 )
(BLAST)

001: MEVSNSCSSF SSSSVDSTKP SPSESSVNLS LSLTFPSTSP QREARQDWPP IKSRLRDTLK GRRLLRRGDD TSLFVKVYME GVPIGRKLDL CVFSGYESLL
101: ENLSHMFDTS IICGNRDRKH HVLTYEDKDG DWMMVGDIPW DMFLETVRRL KITRPERY

Arabidopsis Description

IAA31Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A178V8S2]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.