Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024187.1-P | Field mustard | plastid | 93.83 | 95.48 |
| CDY51701 | Canola | nucleus | 46.42 | 93.53 |
| CDY38374 | Canola | nucleus | 46.17 | 78.57 |
| CDY35203 | Canola | nucleus | 46.17 | 76.95 |
| AT4G28640.2 | Thale cress | cytosol, nucleus, plastid | 48.4 | 64.9 |
| CDY18243 | Canola | nucleus | 26.42 | 46.32 |
| CDY53196 | Canola | nucleus | 25.93 | 46.26 |
| CDY19477 | Canola | nucleus | 26.67 | 45.96 |
| CDX84693 | Canola | nucleus | 27.41 | 45.87 |
| CDY17158 | Canola | nucleus | 26.67 | 45.76 |
| CDX79522 | Canola | nucleus | 27.65 | 45.53 |
| CDY59182 | Canola | nucleus | 25.19 | 45.33 |
| CDX89814 | Canola | nucleus | 26.17 | 45.11 |
| CDY46895 | Canola | cytosol | 7.41 | 41.67 |
| CDY18205 | Canola | cytosol, nucleus, plastid | 26.91 | 40.22 |
| CDX89844 | Canola | cytosol, nucleus, plastid | 26.91 | 40.22 |
| CDX95843 | Canola | plastid | 14.32 | 37.42 |
| CDX92140 | Canola | nucleus, plastid | 14.57 | 37.34 |
| CDY71609 | Canola | nucleus, plastid | 14.32 | 36.94 |
| CDX87072 | Canola | cytosol | 15.8 | 36.57 |
| CDX82361 | Canola | cytosol, plastid | 14.07 | 36.31 |
| CDX67874 | Canola | plastid | 15.31 | 35.84 |
| CDY25089 | Canola | plastid | 15.31 | 35.84 |
| CDX88204 | Canola | cytosol, nucleus, peroxisome | 15.06 | 35.06 |
| CDX80545 | Canola | cytosol, nucleus, plastid | 15.06 | 35.06 |
| CDY58757 | Canola | plastid | 14.57 | 34.3 |
| CDY48005 | Canola | cytosol, plastid | 14.57 | 33.91 |
| CDY11402 | Canola | plastid | 14.57 | 33.33 |
| CDY27511 | Canola | cytosol, plastid | 14.32 | 33.33 |
| CDY19790 | Canola | cytosol | 15.06 | 31.28 |
| CDY22876 | Canola | nucleus | 19.51 | 31.23 |
| CDY33844 | Canola | nucleus | 19.01 | 30.43 |
| CDX87863 | Canola | nucleus | 18.77 | 29.92 |
| CDY46538 | Canola | nucleus | 19.75 | 29.63 |
| CDY34957 | Canola | nucleus | 19.51 | 29.37 |
| CDY64626 | Canola | cytosol | 19.26 | 29.0 |
| CDY53439 | Canola | nucleus | 19.51 | 28.94 |
| CDY43104 | Canola | nucleus | 19.01 | 28.84 |
| CDY46058 | Canola | plastid | 11.6 | 28.14 |
| CDX75884 | Canola | cytosol | 18.77 | 28.04 |
| CDX92077 | Canola | nucleus | 19.26 | 27.37 |
| CDX82399 | Canola | nucleus | 18.27 | 27.21 |
| CDX75231 | Canola | nucleus | 14.07 | 24.68 |
| CDX68829 | Canola | nucleus | 13.83 | 24.56 |
| CDX72351 | Canola | nucleus | 13.09 | 21.46 |
| CDY13478 | Canola | nucleus | 12.84 | 21.4 |
Protein Annotations
| MapMan:1.1.1.3.9 | Gene3D:2.40.30.220 | Gene3D:3.10.20.90 | GO:A0A078DZZ6 | InterPro:AUX/IAA_dom | EnsemblPlants:CDX92888 |
| ProteinID:CDX92888 | ProteinID:CDX92888.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009523 | GO:GO:0009579 | GO:GO:0009654 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 |
| GO:GO:0015979 | GO:GO:0016020 | EnsemblPlantsGene:GSBRNA2T00154728001 | InterPro:IPR000270 | InterPro:IPR038676 | HAMAP:MF_01370 |
| InterPro:PB1_dom | PFAM:PD012692 | PFAM:PF02309 | PFAM:PF03912 | PFscan:PS51745 | InterPro:PSII_Psb28_class-1 |
| PANTHER:PTHR34963 | PANTHER:PTHR34963:SF2 | InterPro:Psb28_c1_sf | SUPFAM:SSF54277 | TIGRFAMs:TIGR03047 | UniParc:UPI0004EF2D7E |
| SEG:seg | : | : | : | : | : |
Description
BnaC07g41460D
Coordinates
chrLK031873:+:1352904..1355965
Molecular Weight (calculated)
44475.2 Da
IEP (calculated)
7.951
GRAVY (calculated)
-0.336
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGSASGSA STLSNNENVL VSCEDSSSPA ENELELGLTL SLGRERRVSY ADDSSSSSLS SRASVTAGIK RTADSMAATS GQVVGWPPIR SYRMNSMVNQ
101: SKTLAMEDPI KNRTDGTTKM RMFVKVTMDG IPIGRKIDLN AHRCYESLSN TLEEMFLKPK TDGNLETRLK ILPDGSSGFV LTYEDKEGDW MLVGDVPWGM
201: FIGSVKRLRI MKTSEATGTE MACVRSIRSL TSVTQSPRYV SRTTGIVMSS CSVHPIAPSS FTGSPISLPR VHPPTPTTLI RPRSLVPITM MVKPTLQFIQ
301: GTDELTIPDV KLTRSRDGSN GMALFSFDQP SVFDSSGEVG EITGLYMIDE EGVIQSTDVN ARFVNGKPEG IVAKHVMRTP KEWDRFMRFM ERYSDQNGLQ
401: FVKKQ
101: SKTLAMEDPI KNRTDGTTKM RMFVKVTMDG IPIGRKIDLN AHRCYESLSN TLEEMFLKPK TDGNLETRLK ILPDGSSGFV LTYEDKEGDW MLVGDVPWGM
201: FIGSVKRLRI MKTSEATGTE MACVRSIRSL TSVTQSPRYV SRTTGIVMSS CSVHPIAPSS FTGSPISLPR VHPPTPTTLI RPRSLVPITM MVKPTLQFIQ
301: GTDELTIPDV KLTRSRDGSN GMALFSFDQP SVFDSSGEVG EITGLYMIDE EGVIQSTDVN ARFVNGKPEG IVAKHVMRTP KEWDRFMRFM ERYSDQNGLQ
401: FVKKQ
001: MEGGSASGSA SALSNDENLV VSCEDSSSPI GNELELGLTL SLGRKGYRDC RVYADDSSSS SSSSSLSRAS VIAGIKRTAD SMAATSGQVV GWPPIRTYRM
101: NSMVNQAKAS ATEDPNLEIS QAVNKNRSDS TKMRNSMFVK VTMDGIPIGR KIDLNAHKCY ESLSNTLEEM FLKPKLGSRT LETDGHMETP VKILPDGSSG
201: LVLTYEDKEG DWMLVGDVPW GMFIGSVRRL RIMKTSEATG KDDIMKQIII YEEPFMFEAV IRQITDQRED KNIVRSFFFF SPLYSFFFGS AIFLLVSYMF
301: SL
101: NSMVNQAKAS ATEDPNLEIS QAVNKNRSDS TKMRNSMFVK VTMDGIPIGR KIDLNAHKCY ESLSNTLEEM FLKPKLGSRT LETDGHMETP VKILPDGSSG
201: LVLTYEDKEG DWMLVGDVPW GMFIGSVRRL RIMKTSEATG KDDIMKQIII YEEPFMFEAV IRQITDQRED KNIVRSFFFF SPLYSFFFGS AIFLLVSYMF
301: SL
Arabidopsis Description
IAA11Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A8MR39]
SUBAcon: [cytosol,nucleus,plastid]
SUBAcon: [cytosol,nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.