Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400050101 | Potato | cytosol, nucleus, plastid | 98.01 | 98.8 |
| VIT_14s0081g00010.t01 | Wine grape | nucleus, plastid | 59.36 | 87.65 |
| KRH68738 | Soybean | nucleus | 69.32 | 71.6 |
| KRG92683 | Soybean | nucleus | 63.35 | 70.04 |
| KRG96977 | Soybean | nucleus | 64.14 | 70.0 |
| Solyc06g008590.2.1 | Tomato | nucleus | 56.57 | 68.27 |
| Solyc09g083290.2.1 | Tomato | nucleus | 63.74 | 67.8 |
| Solyc06g053830.2.1 | Tomato | nucleus | 57.77 | 66.51 |
| GSMUA_Achr10P... | Banana | nucleus | 60.56 | 63.07 |
| GSMUA_Achr8P20610_001 | Banana | nucleus | 60.16 | 61.89 |
| Solyc06g084070.2.1 | Tomato | nucleus, plastid | 37.45 | 60.26 |
| GSMUA_Achr9P25550_001 | Banana | nucleus | 58.17 | 60.08 |
| GSMUA_Achr4P21020_001 | Banana | nucleus | 58.96 | 59.68 |
| TraesCS5A01G058600.1 | Wheat | nucleus | 59.76 | 59.29 |
| TraesCS5D01G069300.1 | Wheat | nucleus | 59.36 | 59.13 |
| KRH34091 | Soybean | cytosol, nucleus, plastid | 54.18 | 58.87 |
| TraesCS5B01G058500.1 | Wheat | nucleus | 58.96 | 58.73 |
| GSMUA_Achr9P10700_001 | Banana | nucleus | 56.18 | 58.51 |
| Solyc04g054280.1.1 | Tomato | nucleus | 37.45 | 56.63 |
| EES17334 | Sorghum | cytosol | 62.15 | 55.52 |
| GSMUA_Achr4P22520_001 | Banana | nucleus | 55.38 | 54.94 |
| EER90896 | Sorghum | nucleus | 51.39 | 54.89 |
| Zm00001d033976_P002 | Maize | nucleus | 51.79 | 54.85 |
| TraesCS5D01G392000.1 | Wheat | nucleus | 50.6 | 54.74 |
| Os03t0742900-01 | Rice | vacuole | 51.39 | 54.66 |
| TraesCS5A01G382600.1 | Wheat | nucleus | 50.6 | 54.51 |
| TraesCS5B01G386800.1 | Wheat | nucleus | 50.6 | 54.27 |
| Solyc09g065850.2.1 | Tomato | nucleus | 39.84 | 54.05 |
| HORVU5Hr1G014300.4 | Barley | nucleus | 59.36 | 53.99 |
| Os03t0633500-01 | Rice | cytosol | 49.8 | 53.65 |
| TraesCS5B01G381900.1 | Wheat | cytosol, mitochondrion, nucleus | 53.78 | 53.36 |
| HORVU5Hr1G094220.1 | Barley | nucleus | 50.2 | 53.16 |
| Zm00001d013302_P002 | Maize | nucleus | 48.21 | 53.07 |
| Os12t0601300-01 | Rice | nucleus | 58.17 | 52.71 |
| Solyc06g008580.2.1 | Tomato | nucleus | 39.84 | 52.63 |
| Solyc09g083280.2.1 | Tomato | nucleus | 40.64 | 52.04 |
| OQU91311 | Sorghum | cytosol, mitochondrion, nucleus | 53.78 | 51.14 |
| Solyc06g053840.2.1 | Tomato | nucleus | 37.05 | 48.95 |
| Solyc03g120380.2.1 | Tomato | nucleus | 35.86 | 46.88 |
| HORVU5Hr1G093580.2 | Barley | cytosol, nucleus, peroxisome | 51.79 | 46.26 |
| Solyc03g120390.2.1 | Tomato | nucleus, plastid | 43.82 | 43.65 |
| Solyc03g120500.2.1 | Tomato | nucleus | 47.81 | 43.17 |
| Zm00001d041416_P001 | Maize | nucleus | 58.57 | 42.73 |
| Solyc12g007230.1.1 | Tomato | nucleus | 49.4 | 42.03 |
| TraesCS5D01G388300.2 | Wheat | cytosol | 52.59 | 41.9 |
| TraesCS5A01G378300.2 | Wheat | cytosol, mitochondrion, nucleus | 49.8 | 40.98 |
| Solyc04g076850.2.1 | Tomato | nucleus | 50.6 | 36.39 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | UniProt:G9HPW4 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | InterPro:IPR000270 |
| EMBL:JN379443 | InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF28 |
| SUPFAM:SSF54277 | EnsemblPlantsGene:Solyc01g097290.2 | EnsemblPlants:Solyc01g097290.2.1 | UniParc:UPI000243DBFD | : | : |
Description
Auxin-responsive protein IAA16 [Source:Projected from Arabidopsis thaliana (AT3G04730) UniProtKB/Swiss-Prot;Acc:O24407]
Coordinates
chr1:+:88196545..88199405
Molecular Weight (calculated)
27594.9 Da
IEP (calculated)
8.284
GRAVY (calculated)
-0.503
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSVLGAECD KIRLDYEAET ELRLGLPGAN GNELESSNKN NGKRVFSETV DLKLNLSNSK DSTLMDNINI NQVDNMKEKK NNIVVPSSND PAKPPAKAQV
101: VGWPPVRSFR KNVMTVQKNT TGAGEISGTG TGAAFVKVSV DGAPYLRKVD LKMYKSYQQL SDALGKMFSS FTIGNCGTQG FKDFMNESKL IDLLNGSDYV
201: PTYEDKDGDW MLVGDVPWEM FVDSCKRLRI MKGSEAIGLA PRAVEKCKNR S
101: VGWPPVRSFR KNVMTVQKNT TGAGEISGTG TGAAFVKVSV DGAPYLRKVD LKMYKSYQQL SDALGKMFSS FTIGNCGTQG FKDFMNESKL IDLLNGSDYV
201: PTYEDKDGDW MLVGDVPWEM FVDSCKRLRI MKGSEAIGLA PRAVEKCKNR S
001: MINFEATELR LGLPGGNHGG EMAGKNNGKR GFSETVDLKL NLSSTAMDSV SKVDLENMKE KVVKPPAKAQ VVGWPPVRSF RKNVMSGQKP TTGDATEGND
101: KTSGSSGATS SASACATVAY VKVSMDGAPY LRKIDLKLYK TYQDLSNALS KMFSSFTIGN YGPQGMKDFM NESKLIDLLN GSDYVPTYED KDGDWMLVGD
201: VPWEMFVDSC KRIRIMKGSE AIGLAPRALE KCKNRS
101: KTSGSSGATS SASACATVAY VKVSMDGAPY LRKIDLKLYK TYQDLSNALS KMFSSFTIGN YGPQGMKDFM NESKLIDLLN GSDYVPTYED KDGDWMLVGD
201: VPWEMFVDSC KRIRIMKGSE AIGLAPRALE KCKNRS
Arabidopsis Description
IAA16Auxin-responsive protein IAA16 [Source:UniProtKB/Swiss-Prot;Acc:O24407]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.