Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400041976 | Potato | nucleus | 89.45 | 91.55 |
| Solyc09g083290.2.1 | Tomato | nucleus | 72.94 | 67.37 |
| Solyc06g008590.2.1 | Tomato | nucleus | 63.3 | 66.35 |
| GSMUA_Achr8P20610_001 | Banana | nucleus | 68.35 | 61.07 |
| GSMUA_Achr10P... | Banana | nucleus | 67.43 | 61.0 |
| GSMUA_Achr9P25550_001 | Banana | nucleus | 67.43 | 60.49 |
| GSMUA_Achr4P21020_001 | Banana | nucleus | 66.97 | 58.87 |
| GSMUA_Achr9P10700_001 | Banana | nucleus | 64.68 | 58.51 |
| Solyc01g097290.2.1 | Tomato | nucleus | 66.51 | 57.77 |
| Solyc06g084070.2.1 | Tomato | nucleus, plastid | 41.28 | 57.69 |
| TraesCS5A01G058600.1 | Wheat | nucleus | 65.14 | 56.13 |
| TraesCS5D01G069300.1 | Wheat | nucleus | 64.68 | 55.95 |
| TraesCS5B01G058500.1 | Wheat | nucleus | 64.68 | 55.95 |
| Os03t0742900-01 | Rice | vacuole | 57.34 | 52.97 |
| EER90896 | Sorghum | nucleus | 56.88 | 52.77 |
| TraesCS5D01G392000.1 | Wheat | nucleus | 55.96 | 52.59 |
| Solyc09g065850.2.1 | Tomato | nucleus | 44.5 | 52.43 |
| Solyc04g054280.1.1 | Tomato | nucleus | 39.91 | 52.41 |
| TraesCS5A01G382600.1 | Wheat | nucleus | 55.96 | 52.36 |
| Zm00001d033976_P002 | Maize | nucleus | 56.88 | 52.32 |
| GSMUA_Achr4P22520_001 | Banana | nucleus | 60.55 | 52.17 |
| TraesCS5B01G386800.1 | Wheat | nucleus | 55.96 | 52.14 |
| HORVU5Hr1G094220.1 | Barley | nucleus | 56.42 | 51.9 |
| HORVU5Hr1G014300.4 | Barley | nucleus | 65.14 | 51.45 |
| Zm00001d013302_P002 | Maize | nucleus | 53.67 | 51.32 |
| EES17334 | Sorghum | cytosol | 65.6 | 50.89 |
| Os03t0633500-01 | Rice | cytosol | 53.67 | 50.21 |
| Os12t0601300-01 | Rice | nucleus | 63.76 | 50.18 |
| TraesCS5B01G381900.1 | Wheat | cytosol, mitochondrion, nucleus | 57.8 | 49.8 |
| Solyc09g083280.2.1 | Tomato | nucleus | 43.58 | 48.47 |
| Solyc06g008580.2.1 | Tomato | nucleus | 41.74 | 47.89 |
| OQU91311 | Sorghum | cytosol, mitochondrion, nucleus | 57.8 | 47.73 |
| Solyc03g120380.2.1 | Tomato | nucleus | 40.83 | 46.35 |
| Solyc06g053840.2.1 | Tomato | nucleus | 39.91 | 45.79 |
| HORVU5Hr1G093580.2 | Barley | cytosol, nucleus, peroxisome | 55.05 | 42.7 |
| Solyc03g120500.2.1 | Tomato | nucleus | 53.21 | 41.73 |
| Solyc03g120390.2.1 | Tomato | nucleus, plastid | 47.25 | 40.87 |
| Zm00001d041416_P001 | Maize | nucleus | 61.93 | 39.24 |
| TraesCS5D01G388300.2 | Wheat | cytosol | 56.42 | 39.05 |
| Solyc12g007230.1.1 | Tomato | nucleus | 52.75 | 38.98 |
| TraesCS5A01G378300.2 | Wheat | cytosol, mitochondrion, nucleus | 54.13 | 38.69 |
| Solyc04g076850.2.1 | Tomato | nucleus | 56.88 | 35.53 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | UniProt:G9HPV6 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009734 |
| GO:GO:0009987 | GO:GO:0042802 | GO:GO:1900057 | InterPro:IPR000270 | EMBL:JN379435 | InterPro:PB1_dom |
| PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF28 | SUPFAM:SSF54277 | EnsemblPlantsGene:Solyc06g053830.2 |
| EnsemblPlants:Solyc06g053830.2.1 | UniParc:UPI000243DBF6 | SEG:seg | : | : | : |
Description
Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:G9HPV6]
Coordinates
chr6:-:36689902..36692281
Molecular Weight (calculated)
24675.5 Da
IEP (calculated)
9.326
GRAVY (calculated)
-0.756
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLKTELCLG LPGGGGDHNI KKRGFSQTVD LKLNLHHNDN IPSMNINNPP KDNSSNKPPT KAQVVGWPPV RSFRKNMLSQ KGNNNNNNNE EISEKDEKTI
101: AFVKVSMDGA PYLRKVDLKM YKSYQQLSHS LTNMFSSFTM GNYGSQGMID FMNERKLMDV LNSSDYVPTY EDKDGDWMLV GDVPWQMFVD SCKRLRIMKG
201: SEAIGLAPRA MEKCKNRS
101: AFVKVSMDGA PYLRKVDLKM YKSYQQLSHS LTNMFSSFTM GNYGSQGMID FMNERKLMDV LNSSDYVPTY EDKDGDWMLV GDVPWQMFVD SCKRLRIMKG
201: SEAIGLAPRA MEKCKNRS
001: MNLKETELCL GLPGGTETVE SPAKSGVGNK RGFSETVDLK LNLQSNKQGH VDLNTNGAPK EKTFLKDPSK PPAKAQVVGW PPVRNYRKNV MANQKSGEAE
101: EAMSSGGGTV AFVKVSMDGA PYLRKVDLKM YTSYKDLSDA LAKMFSSFTM GSYGAQGMID FMNESKVMDL LNSSEYVPSY EDKDGDWMLV GDVPWPMFVE
201: SCKRLRIMKG SEAIGLAPRA MEKFKNRS
101: EAMSSGGGTV AFVKVSMDGA PYLRKVDLKM YTSYKDLSDA LAKMFSSFTM GSYGAQGMID FMNESKVMDL LNSSEYVPSY EDKDGDWMLV GDVPWPMFVE
201: SCKRLRIMKG SEAIGLAPRA MEKFKNRS
Arabidopsis Description
IAA14indole-3-acetic acid inducible 14 [Source:TAIR;Acc:AT4G14550]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.