Factsheet for HORVU3Hr1G022540.7

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G123400.1	Wheat	nucleus	78.24	96.02
TraesCS3B01G140700.1	Wheat	cytosol	74.54	83.42
TraesCS3A01G121300.2	Wheat	nucleus	77.78	83.17
KXG31707	Sorghum	nucleus	65.28	64.09
Zm00001d039624_P001	Maize	nucleus	64.35	63.18
HORVU1Hr1G025670.3	Barley	nucleus	56.02	60.5
Zm00001d008749_P002	Maize	cytosol	56.94	56.16
GSMUA_Achr9P02960_001	Banana	nucleus	44.44	46.38
GSMUA_AchrUn_...	Banana	nucleus	44.44	43.84
KRH23505	Soybean	nucleus	37.04	43.72
KRH09810	Soybean	nucleus	37.04	42.33
HORVU7Hr1G084940.3	Barley	plastid	35.65	40.96
VIT_11s0016g04490.t01	Wine grape	cytosol, nucleus, plastid	40.74	40.74
PGSC0003DMT400006798	Potato	nucleus	39.35	40.09
Solyc03g120390.2.1	Tomato	nucleus, plastid	42.59	36.51
GSMUA_Achr4P08960_001	Banana	nucleus	45.37	36.03
HORVU5Hr1G094220.1	Barley	nucleus	35.65	32.49
GSMUA_Achr7P13250_001	Banana	nucleus	42.59	30.98
HORVU5Hr1G014300.4	Barley	nucleus	39.35	30.8
VIT_09s0002g05160.t01	Wine grape	nucleus	39.81	29.25
HORVU0Hr1G021630.1	Barley	cytosol, mitochondrion, nucleus	24.54	28.8
HORVU3Hr1G031460.1	Barley	cytosol	30.56	28.7
HORVU5Hr1G093580.2	Barley	cytosol, nucleus, peroxisome	36.11	27.76
HORVU3Hr1G062160.2	Barley	nucleus, plastid	32.87	27.31
HORVU5Hr1G106350.2	Barley	plastid	26.85	25.78
HORVU3Hr1G088810.1	Barley	plastid	28.24	25.74
HORVU5Hr1G014290.1	Barley	mitochondrion	28.7	24.22
HORVU1Hr1G086070.6	Barley	plastid	32.87	22.68
HORVU5Hr1G093640.1	Barley	mitochondrion	29.17	20.06

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.1	UniProt:A0A287KEL3	InterPro:AUX/IAA_dom	InterPro:AUX_IAA	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009734	GO:GO:0009987	EnsemblPlantsGene:HORVU3Hr1G022540
EnsemblPlants:HORVU3Hr1G022540.7	InterPro:IPR000270	InterPro:PB1_dom	PFAM:PF02309	PFscan:PS51745	PANTHER:PTHR31734
PANTHER:PTHR31734:SF86	SUPFAM:SSF54277	UniParc:UPI000B472C97	SEG:seg	:	:

Description

Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A287KEL3]

Coordinates

chrchr3H:-:80618541..80619563

Molecular Weight (calculated)

23063.7 Da

IEP (calculated)

6.819

GRAVY (calculated)

-0.591

Length

216 amino acids

Sequence
(BLAST)

001: QHKAGPQAAP AAAAEEDDAA DTADTRGAQE RPAAMSAETE RSSTESSAVS GLDFEDTALT LTLRLPGSSP ADPDRKRGAS SSSSSRSLAD RSSLLAEAPP
101: APKARVVGWP PVRSFRKNAL ENVAAGSTRA AAAAPAKFVK VAVDGAPYLR KVNLRDHAGY DQLLRALQDK FRSHFTIRKF ANDEKKLVDA VNGTEYVPTY
201: EDKDGDWMLV GDVPWK

Best Arabidopsis Sequence Match ( AT1G04250.1 )
(BLAST)

001: MMGSVELNLR ETELCLGLPG GDTVAPVTGN KRGFSETVDL KLNLNNEPAN KEGSTTHDVV TFDSKEKSAC PKDPAKPPAK AQVVGWPPVR SYRKNVMVSC
101: QKSSGGPEAA AFVKVSMDGA PYLRKIDLRM YKSYDELSNA LSNMFSSFTM GKHGGEEGMI DFMNERKLMD LVNSWDYVPS YEDKDGDWML VGDVPWPMFV
201: DTCKRLRLMK GSDAIGLAPR AMEKCKSRA

Arabidopsis Description

IAA17Auxin-responsive protein IAA17 [Source:UniProtKB/Swiss-Prot;Acc:P93830]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.