CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG92429
KRG96405
KRH34377
KRH68142

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G12820.1	KRG92429	AT3G23050.1	15992545
AT1G12820.1	KRH34377	AT3G23050.1	15992545
AT1G12820.1	KRG96405	AT4G02570.1	15992545
AT1G12820.1	KRH68142	AT4G02570.1	15992545
AT3G26810.1	KRG92429	AT3G23050.1	15992545
AT3G26810.1	KRH34377	AT3G23050.1	15992545

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70053	Soybean	cytosol	84.47	84.47
KRH06858	Soybean	cytosol	77.84	77.97
KRG94665	Soybean	cytosol	77.84	77.97
VIT_14s0068g01330.t01	Wine grape	cytosol	72.95	73.08
AT3G26810.1	Thale cress	cytosol	70.51	70.26
CDY28523	Canola	cytosol	69.11	68.87
Bra032954.1-P	Field mustard	cytosol	69.11	68.87
CDY34211	Canola	cytosol	68.94	68.7
AT1G12820.1	Thale cress	cytosol	69.11	68.63
GSMUA_AchrUn_...	Banana	cytosol	63.18	67.92
CDY16034	Canola	cytosol	67.54	66.84
CDX71968	Canola	cytosol	67.36	66.78
Bra026953.1-P	Field mustard	cytosol	67.19	66.61
CDY26594	Canola	cytosol	67.02	66.44
GSMUA_Achr9P01140_001	Banana	cytosol	61.78	66.42
GSMUA_Achr6P16510_001	Banana	cytosol	61.26	65.85
GSMUA_Achr6P08000_001	Banana	cytosol	61.26	65.85
GSMUA_Achr10P...	Banana	cytosol	61.26	65.85
CDY31282	Canola	cytosol	66.84	65.25
Bra016754.1-P	Field mustard	cytosol	67.02	65.08
CDY21068	Canola	cytosol	66.84	64.92
GSMUA_Achr6P20580_001	Banana	cytosol	54.1	62.0
HORVU2Hr1G070800.1	Barley	cytosol	61.08	60.98
TraesCS2D01G285000.1	Wheat	cytosol	60.91	60.8
TraesCS2A01G286200.1	Wheat	cytosol	60.91	60.8
TraesCS2B01G302900.1	Wheat	cytosol	60.73	60.63
Os04t0395600-01	Rice	cytosol	60.73	60.52
Zm00001d003911_P003	Maize	cytosol	60.38	60.17
HORVU6Hr1G021040.2	Barley	extracellular	14.66	60.0
Zm00001d025268_P001	Maize	cytosol	58.99	58.99
KXG26136	Sorghum	cytosol	60.56	58.52
Os11t0515500-01	Rice	cytosol	57.24	57.75
HORVU5Hr1G075620.2	Barley	cytosol	56.72	57.22
TraesCS5D01G288000.1	Wheat	cytosol	55.85	56.24
KRH68108	Soybean	cytosol	57.42	56.14
TraesCS5A01G281100.1	Wheat	cytosol	55.67	56.06
EES09791	Sorghum	cytosol	56.37	55.88
KRG96377	Soybean	cytosol	57.24	55.88
TraesCS5B01G280100.1	Wheat	cytosol	55.67	55.77
Zm00001d007357_P005	Maize	cytosol	55.32	55.32
KRH31921	Soybean	cytosol	55.32	54.19
KRH71533	Soybean	cytosol	54.97	53.85
KRH49941	Soybean	cytosol	48.87	48.44
KRH41935	Soybean	cytosol	48.69	48.19
KRH62206	Soybean	cytosol	47.64	46.83
KRH52925	Soybean	cytosol	47.82	46.68
KRH72427	Soybean	cytosol	47.99	43.65
KRH16819	Soybean	cytosol	47.99	42.97
KRH14993	Soybean	cytosol	30.89	31.16
KRH31107	Soybean	cytosol	31.76	30.85
KRH73146	Soybean	cytosol	31.41	30.82
KRG97777	Soybean	cytosol	31.41	30.51

Protein Annotations

EMBL:ACUP02010169	EnsemblPlants:KRH08397	EnsemblPlantsGene:GLYMA_16G146400	EntrezGene:100802672	Gene3D:1.20.1280.50	Gene3D:3.80.10.10
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR43944	PANTHER:PTHR43944:SF9	ProteinID:KRH08397
ProteinID:KRH08397.1	SMART:SM00367	SUPFAM:SSF52047	UniParc:UPI000233BD3C	UniProt:I1MNN2	MapMan:11.2.2.1.1
MapMan:19.2.2.8.1.4.6	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:-:30725651..30728927

Molecular Weight (calculated)

64149.9 Da

IEP (calculated)

8.280

GRAVY (calculated)

0.091

Length

573 amino acids

Sequence
(BLAST)

001: MNCFPDEVIG HIFGCVTSQR DRNAVSLVCK NWHRLERCCR KSLFIGNCYT ISPERVIERF PELRSLTLKG KPHFPYFSLV PSGWGGFVAP WIEALARSRV
101: DLEELRLKRM VVSDESLELL SRSFVNFKSL VLVRCEGFTT EGLAAIAANC RFLKDLDLHE NVVTDLKGQW LSCFPDCCTS LVSLNFACLK GQINAGDLER
201: LVARSPNLKS LRLNHTVPLS ALQRILMQAP QLVDLGIGSF VFDPRSEVYN NMKNAILKCM SITSLSGFFW VYPHCLSALY PVCMNLTTLN LRFAAGIQNT
301: ELIKLICCCG KLQRLSIMDC IGDNGLGVVA ATCKDLQELR VFPVVRVGGN GPTRVTEKGL VAISMGCPEL HSLLYFCQQM TNAALITVAK NCPNFIRFRL
401: CILDPTKPDP DTMQPLNEGF GAIVQSCKQL RRLSLSGQLT DQVFLYIGMY AEQLEMLSVA FAGESDKAML YVLNGCKKIH KLAIRGSPFG DSALLMDVGK
501: YETMQFLWMT SCNVTVGACK ALAEKMPRLN VEIFNENKKV DRDVDDGQKV EKMYLYRTLA GRRKDAPELV WTL

Best Arabidopsis Sequence Match ( AT3G26810.1 )
(BLAST)

001: MNYFPDEVIE HVFDFVTSHK DRNAISLVCK SWYKIERYSR QKVFIGNCYA INPERLLRRF PCLKSLTLKG KPHFADFNLV PHEWGGFVLP WIEALARSRV
101: GLEELRLKRM VVTDESLELL SRSFVNFKSL VLVSCEGFTT DGLASIAANC RHLRDLDLQE NEIDDHRGQW LSCFPDTCTT LVTLNFACLE GETNLVALER
201: LVARSPNLKS LKLNRAVPLD ALARLMACAP QIVDLGVGSY ENDPDSESYL KLMAVIKKCT SLRSLSGFLE AAPHCLSAFH PICHNLTSLN LSYAAEIHGS
301: HLIKLIQHCK KLQRLWILDS IGDKGLEVVA STCKELQELR VFPSDLLGGG NTAVTEEGLV AISAGCPKLH SILYFCQQMT NAALVTVAKN CPNFIRFRLC
401: ILEPNKPDHV TSQPLDEGFG AIVKACKSLR RLSLSGLLTD QVFLYIGMYA NQLEMLSIAF AGDTDKGMLY VLNGCKKMKK LEIRDSPFGD TALLADVSKY
501: ETMRSLWMSS CEVTLSGCKR LAEKAPWLNV EIINENDNNR MEENGHEGRQ KVDKLYLYRT VVGTRMDAPP FVWIL

Arabidopsis Description

AFB2AFB2 [Source:UniProtKB/TrEMBL;Acc:A0A178VGF7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.