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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG92429
KRG96405
KRH34377
KRH68142

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G12820.1 KRG92429 AT3G23050.1 15992545
AT1G12820.1 KRH34377 AT3G23050.1 15992545
AT1G12820.1 KRG96405 AT4G02570.1 15992545
AT1G12820.1 KRH68142 AT4G02570.1 15992545
AT3G26810.1 KRG92429 AT3G23050.1 15992545
AT3G26810.1 KRH34377 AT3G23050.1 15992545
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG94665 Soybean cytosol 96.33 96.33
KRH70053 Soybean cytosol 80.94 80.8
VIT_14s0068g01330.t01 Wine grape cytosol 79.72 79.72
KRH08397 Soybean cytosol 77.97 77.84
AT3G26810.1 Thale cress cytosol 75.17 74.78
AT1G12820.1 Thale cress cytosol 75.35 74.7
Bra032954.1-P Field mustard cytosol 73.43 73.04
CDY28523 Canola cytosol 73.43 73.04
CDY34211 Canola cytosol 73.25 72.87
Bra026953.1-P Field mustard cytosol 73.6 72.84
CDX71968 Canola cytosol 73.43 72.66
CDY16034 Canola cytosol 73.43 72.54
GSMUA_AchrUn_... Banana cytosol 67.31 72.23
GSMUA_Achr9P01140_001 Banana cytosol 67.13 72.05
CDY26594 Canola cytosol 72.73 71.97
Bra016754.1-P Field mustard cytosol 73.6 71.36
CDY31282 Canola cytosol 73.08 71.21
GSMUA_Achr10P... Banana cytosol 66.26 71.11
CDY21068 Canola cytosol 73.25 71.02
GSMUA_Achr6P08000_001 Banana cytosol 65.91 70.73
GSMUA_Achr6P16510_001 Banana cytosol 65.56 70.36
GSMUA_Achr6P20580_001 Banana cytosol 58.39 66.8
Zm00001d003911_P003 Maize cytosol 66.26 65.91
TraesCS2D01G285000.1 Wheat cytosol 65.73 65.51
HORVU2Hr1G070800.1 Barley cytosol 65.56 65.33
TraesCS2B01G302900.1 Wheat cytosol 65.38 65.16
TraesCS2A01G286200.1 Wheat cytosol 65.38 65.16
Os04t0395600-01 Rice cytosol 65.38 65.04
KXG26136 Sorghum cytosol 66.78 64.42
Zm00001d025268_P001 Maize cytosol 64.51 64.4
HORVU6Hr1G021040.2 Barley extracellular 15.56 63.57
HORVU5Hr1G075620.2 Barley cytosol 59.27 59.68
TraesCS5D01G288000.1 Wheat cytosol 59.27 59.58
TraesCS5A01G281100.1 Wheat cytosol 59.27 59.58
KRH68108 Soybean cytosol 61.01 59.56
TraesCS5B01G280100.1 Wheat cytosol 59.09 59.09
KRG96377 Soybean cytosol 60.49 58.94
Os11t0515500-01 Rice cytosol 58.22 58.63
EES09791 Sorghum cytosol 59.09 58.48
KRH31921 Soybean cytosol 59.44 58.12
KRH71533 Soybean cytosol 59.09 57.78
Zm00001d007357_P005 Maize cytosol 57.34 57.24
KRH49941 Soybean cytosol 52.8 52.25
KRH41935 Soybean cytosol 52.62 51.99
KRH62206 Soybean cytosol 49.3 48.37
KRH52925 Soybean cytosol 49.3 48.04
KRH72427 Soybean cytosol 49.13 44.6
KRH16819 Soybean cytosol 49.48 44.22
KRH14993 Soybean cytosol 32.87 33.1
KRH31107 Soybean cytosol 33.92 32.88
KRH73146 Soybean cytosol 33.57 32.88
KRG97777 Soybean cytosol 33.39 32.37
Protein Annotations
Gene3D:1.20.1280.50EntrezGene:100788209MapMan:11.2.2.1.1MapMan:19.2.2.8.1.4.6Gene3D:3.80.10.10EMBL:ACUP02009893
InterPro:F-box_domEnsemblPlantsGene:GLYMA_16G050500GO:GO:0003674GO:GO:0005488GO:GO:0005515UniProt:I1MLC0
InterPro:IPR001810InterPro:IPR032675EnsemblPlants:KRH06858ProteinID:KRH06858ProteinID:KRH06858.1InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt_Cys-con_subtypPFAM:PF12937PANTHER:PTHR43944PANTHER:PTHR43944:SF9SMART:SM00367SUPFAM:SSF52047
UniParc:UPI000233DF0ASEG:seg::::
Description
hypothetical protein
Coordinates
chr16:+:4853237..4856710
Molecular Weight (calculated)
64431.8 Da
IEP (calculated)
8.037
GRAVY (calculated)
-0.007
Length
572 amino acids
Sequence
(BLAST)
001: MMNYFPDEVI EHIFDYVVSH SDRNALSLVC KSWYRIERCT RQRVFIGNCY SITPERLIQR FPGLKSLTLK GKPHFADFSL VPYDWGGFVH PWIEALAKNK
101: VGLEELRLKR MVVSDESLEL LSRSFTHFKS LVLVSCEGFS TDGLAALAAN CRFLRELDLQ ENEVEDHKGQ WLSCFPDNCT SLVSLNFACL KGEVSLGALE
201: RLVARSPYLK SLKLNRSVPF DALQRIMMRA PQLSDLGIGS FVHDPESEAY IKLKNTILKR KSITSLSGFL EVAPHCLAAI YPICPNLTSL NLSYAAGIQG
301: SDLIKLIRHC VKLQRLLIMD CIGDKGLDVV ATSCKDLQEL RVFPSVPFGN PAAVTEKGLV AISMGCPKLH SLLYFCHQMT NAALITVAKN CPNFIRFRLC
401: ILDATKPDPD TMQPLDEGFG AIVQSCRRLR RLSLSGQLTD QVFLYIGMYA EKLEMLSIAF AGESDKGMLY VLNGCKKLRK LEIRDCPFGN VALLTDVGKY
501: ETMRSLWMSS CEVTVGACKL LAKKMPRLNV EIFNENEQED CSLEDGQKVE KMYLYRTLAG KRKDAPEYVW TL
Best Arabidopsis Sequence Match ( AT3G26810.1 )
(BLAST)
001: MNYFPDEVIE HVFDFVTSHK DRNAISLVCK SWYKIERYSR QKVFIGNCYA INPERLLRRF PCLKSLTLKG KPHFADFNLV PHEWGGFVLP WIEALARSRV
101: GLEELRLKRM VVTDESLELL SRSFVNFKSL VLVSCEGFTT DGLASIAANC RHLRDLDLQE NEIDDHRGQW LSCFPDTCTT LVTLNFACLE GETNLVALER
201: LVARSPNLKS LKLNRAVPLD ALARLMACAP QIVDLGVGSY ENDPDSESYL KLMAVIKKCT SLRSLSGFLE AAPHCLSAFH PICHNLTSLN LSYAAEIHGS
301: HLIKLIQHCK KLQRLWILDS IGDKGLEVVA STCKELQELR VFPSDLLGGG NTAVTEEGLV AISAGCPKLH SILYFCQQMT NAALVTVAKN CPNFIRFRLC
401: ILEPNKPDHV TSQPLDEGFG AIVKACKSLR RLSLSGLLTD QVFLYIGMYA NQLEMLSIAF AGDTDKGMLY VLNGCKKMKK LEIRDSPFGD TALLADVSKY
501: ETMRSLWMSS CEVTLSGCKR LAEKAPWLNV EIINENDNNR MEENGHEGRQ KVDKLYLYRT VVGTRMDAPP FVWIL
Arabidopsis Description
AFB2AFB2 [Source:UniProtKB/TrEMBL;Acc:A0A178VGF7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.