Factsheet for Os11t0515500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0935300-02
Os03t0633500-01
Os03t0742900-01
Os05t0193900-00
Os12t0601300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G12820.1	Os03t0633500-01	AT3G23050.1	15992545
AT1G12820.1	Os03t0742900-01	AT3G23050.1	15992545
AT1G12820.1	Os12t0601300-01	AT3G23050.1	15992545
AT1G12820.1	Os01t0935300-02	AT4G02570.1	15992545
AT1G12820.1	Os05t0193900-00	AT4G02570.1	15992545
AT3G26810.1	Os03t0633500-01	AT3G23050.1	15992545
AT3G26810.1	Os03t0742900-01	AT3G23050.1	15992545
AT3G26810.1	Os12t0601300-01	AT3G23050.1	15992545

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G021040.2	Barley	extracellular	18.66	75.71
TraesCS5A01G281100.1	Wheat	cytosol	72.01	71.88
TraesCS5B01G280100.1	Wheat	cytosol	71.83	71.33
HORVU5Hr1G075620.2	Barley	cytosol	71.3	71.3
TraesCS5D01G288000.1	Wheat	cytosol	71.3	71.18
EES09791	Sorghum	cytosol	70.6	69.38
Zm00001d007357_P005	Maize	cytosol	67.43	66.84
GSMUA_AchrUn_...	Banana	cytosol	60.56	64.54
GSMUA_Achr6P08000_001	Banana	cytosol	60.04	63.98
GSMUA_Achr10P...	Banana	cytosol	58.98	62.85
GSMUA_Achr6P16510_001	Banana	cytosol	58.8	62.66
GSMUA_Achr9P01140_001	Banana	cytosol	58.8	62.66
VIT_14s0068g01330.t01	Wine grape	cytosol	61.8	61.36
Os04t0395600-01	Rice	cytosol	61.27	60.52
KRH70053	Soybean	cytosol	60.04	59.51
GSMUA_Achr6P20580_001	Banana	cytosol	51.76	58.8
AT3G26810.1	Thale cress	cytosol	59.33	58.61
KRG94665	Soybean	cytosol	58.98	58.57
Bra032954.1-P	Field mustard	cytosol	59.15	58.43
KRH06858	Soybean	cytosol	58.63	58.22
CDY34211	Canola	cytosol	58.8	58.09
CDY16034	Canola	cytosol	58.98	57.86
CDX71968	Canola	cytosol	58.8	57.79
Bra026953.1-P	Field mustard	cytosol	58.8	57.79
CDY28523	Canola	cytosol	58.45	57.74
CDY31282	Canola	cytosol	59.51	57.58
AT1G12820.1	Thale cress	cytosol	58.45	57.54
CDY26594	Canola	cytosol	58.27	57.27
KRH08397	Soybean	cytosol	57.75	57.24
Bra016754.1-P	Field mustard	cytosol	59.15	56.95
CDY21068	Canola	cytosol	58.98	56.78
Os05t0150500-00	Rice	plastid	53.7	51.96
Os03t0187500-01	Rice	cytosol	22.01	49.6
Os02t0759700-01	Rice	cytosol	47.89	42.7
Os05t0449500-01	Rice	cytosol	33.1	31.49
Os01t0853400-01	Rice	cytosol	31.16	29.75
Os03t0265500-01	Rice	plasma membrane	29.4	28.35

Protein Annotations

Gene3D:1.20.1280.50	MapMan:11.2.2.1.1	MapMan:19.2.2.8.1.4.6	Gene3D:3.80.10.10	EntrezGene:4350590	ProteinID:ABA93930.1
EMBL:AK072358	ProteinID:BAF28334.2	ProteinID:BAT14190.1	GO:GO:0000822	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009734	GO:GO:0009987
GO:GO:0010011	GO:GO:0016567	GO:GO:0019005	GO:GO:0019538	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt_Cys-con_subtyp	EnsemblPlantsGene:Os11g0515500	EnsemblPlants:Os11t0515500-01	PANTHER:PTHR43944	PANTHER:PTHR43944:SF5	UniProt:Q2R3K5
SMART:SM00367	SUPFAM:SSF52047	UniParc:UPI00006821A9	RefSeq:XP_015617534.1	SEG:seg	:

Description

Os_F0720Similar to transport inhibitor response 1 protein. (Os11t0515500-01)

Coordinates

chr11:-:18485308..18490843

Molecular Weight (calculated)

62395.2 Da

IEP (calculated)

8.541

GRAVY (calculated)

0.158

Length

568 amino acids

Sequence
(BLAST)

001: MVFFPEEVVE HILGFLASHR DRNAVSLVCR EWYRVERLSR RSVLVRNCYA ARPERVHARF PGLRSLSVKG RPRFVPAGWG AAARPWVAAC VAACPGLEEL
101: RLKRMVVTDG CLKLLACSFP NLKSLVLVGC QGFSTDGLAT VATNCRFMKE LDLQESLVED RDSRWLGCFP KPSTLLESLN FSCLTGEVNS PALEILVARS
201: PNLRSLRLNR SVPLDVLARI LCRRPRLVDL CTGSFVRGNI VGAYAGLFNS FQHCSLLKSL SGFWDATSLF IPVIAPVCKN LTCLNLSSAP MVRSAYLIEF
301: ICQCKKLQQL WVLDHIGDEG LKIVASSCIQ LQELRVFPAN ANARASTVTE EGLVAISAGC NKLQSVLYFC QRMTNSALIT VAKNCPRFTS FRLCVLDPGS
401: ADAVTGQPLD EGYGAIVQSC KGLRRLCLSG LLTDTVFLYI GMYAERLEML SVAFAGDTDD GMTYVLNGCK NLKKLEIRDS PFGDSALLAG MHQYEAMRSL
501: WLSSCNVTLG GCKSLAASMA NLNIEVMNRA ASINEADNAN DAKKVKKLYI YRTVAGPRGD APEFISTF

Best Arabidopsis Sequence Match ( AT1G12820.1 )
(BLAST)

001: MNYFPDEVIE HVFDFVASHK DRNSISLVCK SWHKIERFSR KEVFIGNCYA INPERLIRRF PCLKSLTLKG KPHFADFNLV PHEWGGFVHP WIEALARSRV
101: GLEELRLKRM VVTDESLDLL SRSFANFKSL VLVSCEGFTT DGLASIAANC RHLRELDLQE NEIDDHRGQW LNCFPDSCTT LMSLNFACLK GETNVAALER
201: LVARSPNLKS LKLNRAVPLD ALARLMSCAP QLVDLGVGSY ENEPDPESFA KLMTAIKKYT SLRSLSGFLE VAPLCLPAFY PICQNLISLN LSYAAEIQGN
301: HLIKLIQLCK RLQRLWILDS IGDKGLAVVA ATCKELQELR VFPSDVHGEE DNNASVTEVG LVAISAGCPK LHSILYFCKQ MTNAALIAVA KNCPNFIRFR
401: LCILEPHKPD HITFQSLDEG FGAIVQACKG LRRLSVSGLL TDQVFLYIGM YAEQLEMLSI AFAGDTDKGM LYVLNGCKKM RKLEIRDSPF GNAALLADVG
501: RYETMRSLWM SSCEVTLGGC KRLAQNSPRL NVEIINENEN NGMEQNEEDE REKVDKLYLY RTVVGTRKDA PPYVRIL

Arabidopsis Description

AFB3Protein AUXIN SIGNALING F-BOX 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPW7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.