Factsheet for Solyc01g067200.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g067260.2.1	Tomato	plastid	54.17	49.76
Solyc01g067120.2.1	Tomato	cytosol	32.29	36.9
Solyc06g008080.1.1	Tomato	cytosol	44.27	27.78
Solyc01g067100.2.1	Tomato	cytosol	64.58	16.71
Solyc01g099290.2.1	Tomato	cytosol	22.92	16.54
Solyc06g084520.2.1	Tomato	cytosol	55.73	14.46
KRG96405	Soybean	cytosol	55.21	14.36
KRH68142	Soybean	cytosol	54.69	14.17
Solyc09g074680.2.1	Tomato	cytosol	54.17	14.05
Solyc09g010050.1.1	Tomato	cytosol	47.4	12.38
GSMUA_Achr9P17620_001	Banana	cytosol	44.79	11.67
Solyc06g008710.1.1	Tomato	cytosol	38.02	9.83
Solyc02g087900.2.1	Tomato	cytosol	18.23	4.77
Solyc01g010820.2.1	Tomato	cytosol	18.23	4.77
Solyc01g067210.2.1	Tomato	cytosol	11.98	4.04
Solyc02g021470.2.1	Tomato	cytosol, nucleus, plastid	15.62	3.82
Solyc02g070460.2.1	Tomato	plastid	15.62	3.74
Solyc01g067270.2.1	Tomato	cytosol	3.65	3.06
Solyc05g018040.1.1	Tomato	cytosol	2.08	1.59
Solyc01g067140.1.1	Tomato	cytosol	1.04	0.5
Solyc01g067170.1.1	Tomato	mitochondrion, plastid	0.0	0.0

Protein Annotations

Gene3D:1.20.1310.10	MapMan:35.1	InterPro:Cullin_N	InterPro:Cullin_repeat-like_dom_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031461	GO:GO:0031625
GO:GO:0042787	GO:GO:0061630	UniProt:K4AWW9	PFAM:PF00888	PANTHER:PTHR11932	PANTHER:PTHR11932:SF97
SUPFAM:SSF74788	EnsemblPlantsGene:Solyc01g067200.1	EnsemblPlants:Solyc01g067200.1.1	TMHMM:TMhelix	UniParc:UPI0002762D5E	:

Description

No Description!

Coordinates

chr1:+:75612561..75613957

Molecular Weight (calculated)

22617.5 Da

IEP (calculated)

8.196

GRAVY (calculated)

-0.062

Length

192 amino acids

Sequence
(BLAST)

001: MNQLSTIDLE HGWGIIERGI TKLKNILEGL PEPQFNSEDY ITLYTTIYNM SSKNPLNNLS QQLYDKYREA FEEYNITTVL PSLREKHDEF MLRELVKRWL
101: NNKVMIRWLS RFFHYLERYF IPRRSVPGLN EVGVTCFRDQ VIYGSPSLFL FVITVFLWSS IKTSPPDPLV KAPSSAHTIL IFLFLFSGFC LF

Best Arabidopsis Sequence Match ( AT1G43140.1 )
(BLAST)

001: MATILFKVIM MKELILLEEG WSVMKTGVAK LQRILEDLSE PPFDPGQYIN LYTIIYDMCL QQPPNDYSQE LYNKYRGVVD HYNKETVLPS MRERHGEYML
101: RELVKRWANH KILVRWLSRF CFYLDRFYVA RRGLPTLNDV GFTSFHDLVY QEIQSEAKDV LLALIHKERE GEQIDRTLVK NVIDVYCGNG VGQMVIYEED
201: FESFLLQDTA SYYSRKASRW SQEDSCPDYM LKAEECLKLE KERVTNYLHS TTEPKLVEKV QNELLVVVAK QLIENEHSGC LALLRDDKMG DLSRMYRLYR
301: LIPQGLEPIA DLFKQHVTAE GNALIKQAAD AATNQDASAS QVLVRKEIEL HDKYMVYVDE CFQKHSLFHK LLKEAFEVFC NKTVAGASSA EILATYCDNI
401: LKTRGGSEKL SDEATEITLE KVVNLLVYIS DKDLFAEFYR KKQARRLLFD RSGIMKEVTD ITLARELQTN FVDYLSANMT TKLGIDFTVT VLTTGFWPSY
501: KTTDLNLPTE MVNCVEAFKV FYGTKTNSRR LSWIYSLGTC HILGKFEKKT MELVVSTYQA AVLLLFNNAE RLSYTEISEQ LNLSHEDLVR LLHSLSCLKY
601: KILIKEPMSR TISKTDTFEF NSKFTDKMRK IRVPLPPMDE RKKVVEDVDK DRRYAIDAAL VRIMKSRKVL AHQQLVSECV EHLSKMFKPD IKMIKKRIED
701: LINRDYLERD TENANTFKYV A

Arabidopsis Description

Putative cullin-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P0CH31]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.