Factsheet for Solyc01g067270.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g067210.2.1	Tomato	cytosol	60.26	24.25
Solyc01g067100.2.1	Tomato	cytosol	78.17	24.12
Solyc06g008080.1.1	Tomato	cytosol	27.51	20.59
Solyc06g084520.2.1	Tomato	cytosol	65.5	20.27
Solyc09g074680.2.1	Tomato	cytosol	61.14	18.92
Solyc09g010050.1.1	Tomato	cytosol	55.02	17.14
Solyc06g008710.1.1	Tomato	cytosol	48.03	14.8
Solyc01g099290.2.1	Tomato	cytosol	16.16	13.91
Solyc05g018040.1.1	Tomato	cytosol	10.48	9.56
Solyc01g067140.1.1	Tomato	cytosol	15.72	8.91
Solyc01g010820.2.1	Tomato	cytosol	25.76	8.04
Solyc02g087900.2.1	Tomato	cytosol	24.45	7.64
Solyc01g067120.2.1	Tomato	cytosol	4.8	6.55
Solyc02g021470.2.1	Tomato	cytosol, nucleus, plastid	22.27	6.5
Solyc02g070460.2.1	Tomato	plastid	21.83	6.23
Solyc01g067200.1.1	Tomato	cytosol	3.06	3.65
Solyc01g067260.2.1	Tomato	plastid	0.87	0.96
Solyc01g067170.1.1	Tomato	mitochondrion, plastid	0.44	0.75

Protein Annotations

Gene3D:1.20.1310.10	MapMan:35.1	InterPro:Cullin_N	InterPro:Cullin_repeat-like_dom_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	GO:GO:0031461	GO:GO:0031625	GO:GO:0042787	GO:GO:0061630
UniProt:K4AWX6	PFAM:PF00888	PANTHER:PTHR11932	PANTHER:PTHR11932:SF124	SUPFAM:SSF74788	EnsemblPlantsGene:Solyc01g067270.2
EnsemblPlants:Solyc01g067270.2.1	UniParc:UPI0002762D65	:	:	:	:

Description

No Description!

Coordinates

chr1:+:75663995..75673118

Molecular Weight (calculated)

25871.9 Da

IEP (calculated)

7.025

GRAVY (calculated)

-0.349

Length

229 amino acids

Sequence
(BLAST)

001: MGSINYYEND FEAAMLKDTA AYYSGKASNW ILEDSRPHSM LKVSIPRRGV LETEEDRVSH YLHSSSETML LEKVQDELLS VYATQLLEKE QSGFHALLRD
101: DKVEDLSRLY RLFSKIPQGL DPVVIILKQH VTAEGTALVK QAEDAASNKK ADKRDMVGLQ ELVFVRKVVE LHYKYLAYVN NCFQNCTHFH KALKEAFELL
201: SNKAVAGGSS TELLAHSVTK FSKNAGVRN

Best Arabidopsis Sequence Match ( AT1G43140.1 )
(BLAST)

001: MATILFKVIM MKELILLEEG WSVMKTGVAK LQRILEDLSE PPFDPGQYIN LYTIIYDMCL QQPPNDYSQE LYNKYRGVVD HYNKETVLPS MRERHGEYML
101: RELVKRWANH KILVRWLSRF CFYLDRFYVA RRGLPTLNDV GFTSFHDLVY QEIQSEAKDV LLALIHKERE GEQIDRTLVK NVIDVYCGNG VGQMVIYEED
201: FESFLLQDTA SYYSRKASRW SQEDSCPDYM LKAEECLKLE KERVTNYLHS TTEPKLVEKV QNELLVVVAK QLIENEHSGC LALLRDDKMG DLSRMYRLYR
301: LIPQGLEPIA DLFKQHVTAE GNALIKQAAD AATNQDASAS QVLVRKEIEL HDKYMVYVDE CFQKHSLFHK LLKEAFEVFC NKTVAGASSA EILATYCDNI
401: LKTRGGSEKL SDEATEITLE KVVNLLVYIS DKDLFAEFYR KKQARRLLFD RSGIMKEVTD ITLARELQTN FVDYLSANMT TKLGIDFTVT VLTTGFWPSY
501: KTTDLNLPTE MVNCVEAFKV FYGTKTNSRR LSWIYSLGTC HILGKFEKKT MELVVSTYQA AVLLLFNNAE RLSYTEISEQ LNLSHEDLVR LLHSLSCLKY
601: KILIKEPMSR TISKTDTFEF NSKFTDKMRK IRVPLPPMDE RKKVVEDVDK DRRYAIDAAL VRIMKSRKVL AHQQLVSECV EHLSKMFKPD IKMIKKRIED
701: LINRDYLERD TENANTFKYV A

Arabidopsis Description

Putative cullin-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P0CH31]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.