Factsheet for Solyc01g067260.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g067200.1.1	Tomato	cytosol	49.76	54.17
Solyc01g067120.2.1	Tomato	cytosol	23.92	29.76
Solyc06g008080.1.1	Tomato	cytosol	37.32	25.49
Solyc01g099290.2.1	Tomato	cytosol	22.97	18.05
Solyc01g067100.2.1	Tomato	cytosol	61.24	17.25
Solyc06g084520.2.1	Tomato	cytosol	55.02	15.54
Solyc09g074680.2.1	Tomato	cytosol	50.72	14.32
Solyc09g010050.1.1	Tomato	cytosol	39.23	11.16
Solyc06g008710.1.1	Tomato	cytosol	34.45	9.69
Solyc01g010820.2.1	Tomato	cytosol	16.27	4.63
Solyc01g067210.2.1	Tomato	cytosol	11.96	4.39
Solyc02g087900.2.1	Tomato	cytosol	15.31	4.37
Solyc02g070460.2.1	Tomato	plastid	15.79	4.11
Solyc02g021470.2.1	Tomato	cytosol, nucleus, plastid	14.83	3.95
Solyc05g018040.1.1	Tomato	cytosol	1.91	1.59
Solyc01g067270.2.1	Tomato	cytosol	0.96	0.87
Solyc01g067140.1.1	Tomato	cytosol	0.48	0.25
Solyc01g067170.1.1	Tomato	mitochondrion, plastid	0.0	0.0

Protein Annotations

Gene3D:1.20.1310.10	MapMan:35.1	InterPro:Cullin_N	InterPro:Cullin_repeat-like_dom_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	GO:GO:0031461	GO:GO:0031625	GO:GO:0042787	GO:GO:0061630
UniProt:K4AWX5	PFAM:PF00888	PANTHER:PTHR11932	PANTHER:PTHR11932:SF97	SUPFAM:SSF74788	EnsemblPlantsGene:Solyc01g067260.2
EnsemblPlants:Solyc01g067260.2.1	UniParc:UPI0002762D64	:	:	:	:

Description

No Description!

Coordinates

chr1:+:75662632..75669771

Molecular Weight (calculated)

24809.1 Da

IEP (calculated)

9.824

GRAVY (calculated)

-0.544

Length

209 amino acids

Sequence
(BLAST)

001: MAQGTCAILS MHRSLTVPHF EALKSKCSGP YFKRKAKFVA RPTSDFDIEI TINQHSTIDL EHGWVFMQRG ITKLKNILEG LPERIYNMCT QKPPHDYSQQ
101: LYDKYREAFE EYIITTVLPS LRKKHDEFML RGLVKRWSNH KVMVRFLSRI FHYLDRYFIS RRSLPRLNEV GLTCFHDQID QEREGEQIDR ALSRLIKSAR
201: ESKLLEWGQ

Best Arabidopsis Sequence Match ( AT1G43140.1 )
(BLAST)

001: MATILFKVIM MKELILLEEG WSVMKTGVAK LQRILEDLSE PPFDPGQYIN LYTIIYDMCL QQPPNDYSQE LYNKYRGVVD HYNKETVLPS MRERHGEYML
101: RELVKRWANH KILVRWLSRF CFYLDRFYVA RRGLPTLNDV GFTSFHDLVY QEIQSEAKDV LLALIHKERE GEQIDRTLVK NVIDVYCGNG VGQMVIYEED
201: FESFLLQDTA SYYSRKASRW SQEDSCPDYM LKAEECLKLE KERVTNYLHS TTEPKLVEKV QNELLVVVAK QLIENEHSGC LALLRDDKMG DLSRMYRLYR
301: LIPQGLEPIA DLFKQHVTAE GNALIKQAAD AATNQDASAS QVLVRKEIEL HDKYMVYVDE CFQKHSLFHK LLKEAFEVFC NKTVAGASSA EILATYCDNI
401: LKTRGGSEKL SDEATEITLE KVVNLLVYIS DKDLFAEFYR KKQARRLLFD RSGIMKEVTD ITLARELQTN FVDYLSANMT TKLGIDFTVT VLTTGFWPSY
501: KTTDLNLPTE MVNCVEAFKV FYGTKTNSRR LSWIYSLGTC HILGKFEKKT MELVVSTYQA AVLLLFNNAE RLSYTEISEQ LNLSHEDLVR LLHSLSCLKY
601: KILIKEPMSR TISKTDTFEF NSKFTDKMRK IRVPLPPMDE RKKVVEDVDK DRRYAIDAAL VRIMKSRKVL AHQQLVSECV EHLSKMFKPD IKMIKKRIED
701: LINRDYLERD TENANTFKYV A

Arabidopsis Description

Putative cullin-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P0CH31]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.