Factsheet for Solyc01g067210.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	nucleus
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g067100.2.1	Tomato	cytosol	87.87	67.39
Solyc01g067170.1.1	Tomato	mitochondrion, plastid	15.64	66.42
Solyc01g067140.1.1	Tomato	cytosol	46.75	65.84
VIT_05s0020g01320.t01	Wine grape	cytosol	83.66	63.98
KRH02236	Soybean	cytosol, nucleus	82.78	63.31
KRH50876	Soybean	endoplasmic reticulum	82.78	63.31
KRH37131	Soybean	cytosol, nucleus	82.25	62.9
KRH12127	Soybean	cytosol	82.07	62.77
Solyc01g067270.2.1	Tomato	cytosol	24.25	60.26
Solyc06g084520.2.1	Tomato	cytosol	76.8	59.05
Solyc09g074680.2.1	Tomato	cytosol	73.99	56.89
KRH15695	Soybean	cytosol	36.2	56.44
Solyc09g010050.1.1	Tomato	cytosol	66.61	51.56
Solyc06g008710.1.1	Tomato	cytosol	62.92	48.18
Solyc05g018040.1.1	Tomato	cytosol	20.04	45.42
Solyc02g087900.2.1	Tomato	cytosol	34.8	27.01
Solyc01g010820.2.1	Tomato	cytosol	34.62	26.84
Solyc06g008080.1.1	Tomato	cytosol	14.24	26.47
Solyc02g021470.2.1	Tomato	cytosol, nucleus, plastid	33.22	24.08
Solyc02g070460.2.1	Tomato	plastid	33.92	24.06
Solyc01g099290.2.1	Tomato	cytosol	10.72	22.93
Solyc01g067200.1.1	Tomato	cytosol	4.04	11.98
Solyc01g067260.2.1	Tomato	plastid	4.39	11.96
Solyc01g067120.2.1	Tomato	cytosol	3.16	10.71

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.10.10.2620	Gene3D:1.20.1310.10	MapMan:19.2.2.8.1.2	InterPro:Cullin_CS	InterPro:Cullin_N
InterPro:Cullin_homology	InterPro:Cullin_homology_sf	InterPro:Cullin_neddylation_domain	InterPro:Cullin_repeat-like_dom_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	GO:GO:0031461	GO:GO:0031625	GO:GO:0042787	GO:GO:0061630
InterPro:IPR016158	InterPro:IPR036388	UniProt:K4AWX0	PFAM:PF00888	PFAM:PF10557	ScanProsite:PS01256
PFscan:PS50069	PANTHER:PTHR11932	PANTHER:PTHR11932:SF97	SMART:SM00182	SMART:SM00884	SUPFAM:SSF46785
SUPFAM:SSF74788	SUPFAM:SSF75632	EnsemblPlantsGene:Solyc01g067210.2	EnsemblPlants:Solyc01g067210.2.1	UniParc:UPI0002762D5F	InterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sf	:	:	:	:	:

Description

No Description!

Coordinates

chr1:+:75618611..75623746

Molecular Weight (calculated)

66107.2 Da

IEP (calculated)

9.453

GRAVY (calculated)

-0.404

Length

569 amino acids

Sequence
(BLAST)

001: MKDVPFWGLT KKDRISHKLG RRYLTGNCFL FQVYQELNGK VRDAVISLID QEREGEKIDR ALLKNVLNIY VKLGMGLMDF YENSFEAAML KDTSAYYSRK
101: ASNWIIKDSC PDYMLKAEKC LKQEKDRVSH YLHSSSETEL LQKVQHELLS VYATQLLEKE HSGFHALLRD DKVEDLSRMY RLFSKTPRGL DPVANIFKQH
201: VTAEWTALVK QAEDAARNKK ADKRGVVGLL EQVSVRKVIE LHDKYLVVKL LAYISDKDLF AEFYRKKLAR RLLFNKSANV EHERSIITKL KQHCGGQFTS
301: KMEGMVTDLI LARENQASFE EYVSNNPIAN PGIDLTVTVL KTGFWPSYKS FDFNLPTEMI RCVEVFEEFY QTETKHRKLT WIYSLGTCII NGKFEPKSIE
401: LVATTYQASA LLLFNASDRL SYQEIMTQLN LSDDDVVGLL HSLSCAKYKI LNRQPSTKTI SPTDVFEFNS KFTDKMRRIK LPLPPVDEKK KVIENVHKDR
501: RYAIDALIVR IMKSRKVLGY QQLVIECVEQ LGRMFKPDVK SIKKRIEDLI TRDYLERDKD EPNLFKYLA

Best Arabidopsis Sequence Match ( AT1G43140.1 )
(BLAST)

001: MATILFKVIM MKELILLEEG WSVMKTGVAK LQRILEDLSE PPFDPGQYIN LYTIIYDMCL QQPPNDYSQE LYNKYRGVVD HYNKETVLPS MRERHGEYML
101: RELVKRWANH KILVRWLSRF CFYLDRFYVA RRGLPTLNDV GFTSFHDLVY QEIQSEAKDV LLALIHKERE GEQIDRTLVK NVIDVYCGNG VGQMVIYEED
201: FESFLLQDTA SYYSRKASRW SQEDSCPDYM LKAEECLKLE KERVTNYLHS TTEPKLVEKV QNELLVVVAK QLIENEHSGC LALLRDDKMG DLSRMYRLYR
301: LIPQGLEPIA DLFKQHVTAE GNALIKQAAD AATNQDASAS QVLVRKEIEL HDKYMVYVDE CFQKHSLFHK LLKEAFEVFC NKTVAGASSA EILATYCDNI
401: LKTRGGSEKL SDEATEITLE KVVNLLVYIS DKDLFAEFYR KKQARRLLFD RSGIMKEVTD ITLARELQTN FVDYLSANMT TKLGIDFTVT VLTTGFWPSY
501: KTTDLNLPTE MVNCVEAFKV FYGTKTNSRR LSWIYSLGTC HILGKFEKKT MELVVSTYQA AVLLLFNNAE RLSYTEISEQ LNLSHEDLVR LLHSLSCLKY
601: KILIKEPMSR TISKTDTFEF NSKFTDKMRK IRVPLPPMDE RKKVVEDVDK DRRYAIDAAL VRIMKSRKVL AHQQLVSECV EHLSKMFKPD IKMIKKRIED
701: LINRDYLERD TENANTFKYV A

Arabidopsis Description

Putative cullin-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P0CH31]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.