Factsheet for Solyc01g067100.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g01320.t01	Wine grape	cytosol	94.47	94.22
KRH02236	Soybean	cytosol, nucleus	92.99	92.74
KRH37131	Soybean	cytosol, nucleus	92.99	92.74
KRH12127	Soybean	cytosol	92.86	92.61
KRH50876	Soybean	endoplasmic reticulum	92.72	92.47
Solyc01g067210.2.1	Tomato	cytosol	67.39	87.87
KRH15695	Soybean	cytosol	42.05	85.48
Solyc06g084520.2.1	Tomato	cytosol	84.5	84.73
Solyc09g074680.2.1	Tomato	cytosol	81.54	81.76
Solyc01g067270.2.1	Tomato	cytosol	24.12	78.17
Solyc01g067140.1.1	Tomato	cytosol	42.05	77.23
Solyc09g010050.1.1	Tomato	cytosol	71.29	71.97
Solyc01g067170.1.1	Tomato	mitochondrion, plastid	12.8	70.9
Solyc01g067200.1.1	Tomato	cytosol	16.71	64.58
Solyc06g008710.1.1	Tomato	cytosol	64.42	64.33
Solyc05g018040.1.1	Tomato	cytosol	21.7	64.14
Solyc01g067260.2.1	Tomato	plastid	17.25	61.24
Solyc06g008080.1.1	Tomato	cytosol	21.29	51.63
Solyc01g067120.2.1	Tomato	cytosol	10.11	44.64
Solyc01g099290.2.1	Tomato	cytosol	14.29	39.85
Solyc01g010820.2.1	Tomato	cytosol	34.1	34.47
Solyc02g087900.2.1	Tomato	cytosol	33.96	34.38
Solyc02g021470.2.1	Tomato	cytosol, nucleus, plastid	31.81	30.06
Solyc02g070460.2.1	Tomato	plastid	32.21	29.8

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.10.10.2620	Gene3D:1.20.1310.10	MapMan:19.2.2.8.1.2	ncoils:Coil	InterPro:Cullin_CS
InterPro:Cullin_N	InterPro:Cullin_homology	InterPro:Cullin_homology_sf	InterPro:Cullin_neddylation_domain	InterPro:Cullin_repeat-like_dom_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006464	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031461	GO:GO:0031625	GO:GO:0042787
GO:GO:0061630	InterPro:IPR016158	InterPro:IPR036388	UniProt:K4AWV9	PFAM:PF00888	PFAM:PF10557
ScanProsite:PS01256	PFscan:PS50069	PANTHER:PTHR11932	PANTHER:PTHR11932:SF97	SMART:SM00182	SMART:SM00884
SUPFAM:SSF46785	SUPFAM:SSF74788	SUPFAM:SSF75632	EnsemblPlantsGene:Solyc01g067100.2	EnsemblPlants:Solyc01g067100.2.1	UniParc:UPI0002762D54
InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1:-:75462901..75471919

Molecular Weight (calculated)

86397.9 Da

IEP (calculated)

7.226

GRAVY (calculated)

-0.463

Length

742 amino acids

Sequence
(BLAST)

001: MNQRSTIDLE HGWDFMQRGI TKLKNILEGL PEPQFSSEDY MMLYTTIYNM CTQKPPHDYS QQLYDKYREA FEEYITTTVL PSLREKHDEF MLRELVKRWS
101: NHKVMVRWLS RFFHYLDRYF IARRSLPGLN EVGLTCFRDQ VYQELNGKVR DAVISLIDQE REGEQIDRAL LKNVLDIFVE IGMGLMDYYE NDFEAAMLKD
201: TAAYYSRKAS NWILEDSCPD YMLKAEECLK REKDRVSHYL HSSSETKLLE KVQHELLSVY ATQLLEKEHS GCHALLRDDK VEDLSRMYRL FSKISRGLDP
301: VANIFKQHVT AEGTALVKQA EDAASNKKAE KRDVVGLQEQ VFVRKVIELH DKYLAYVNNC FQNHTLFHKA LKEAFELFCN KGVAGSSSAE LLATFCDNIL
401: KKGGSEKLSD EAIEETLEKV VKLLAYISDK DLFAEFYRKK LARRLLFDKS ANDEHERSIL TKLKQQCGGQ FTSKMEGMVT DLTLARENQA SFEEYLSNNP
501: IANPGIDLTV TVLTTGFWPS YKSFDLNLPA EMVRCVEVFK EFYQTKTKHR KLTWIYSLGT CNINGKFEPK TIELVVTTYQ ASALLLFNAS DRLSYQEIMT
601: QLNLSDDDVV RLLHSLSCAK YKILNKEPST KTISPTDVFE FNSKFTDKMR RIKIPLPPVD EKKKVIEDVD KDRRYAIDAS IVRIMKSRKV LGYQQLVMEC
701: VEQLGRMFKP DVKAIKKRIE DLITRDYLER DKDNPNLFKY LA

Best Arabidopsis Sequence Match ( AT4G02570.4 )
(BLAST)

001: MERKTIDLEQ GWDYMQTGIT KLKRILEGLN EPAFDSEQYM MLYTTIYNMC TQKPPHDYSQ QLYDKYREAF EEYINSTVLP ALREKHDEFM LRELFKRWSN
101: HKVMVRWLSR FFYYLDRYFI ARRSLPPLNE VGLTCFRDLV YNELHSKVKQ AVIALVDKER EGEQIDRALL KNVLDIYVEI GMGQMERYEE DFESFMLQDT
201: SSYYSRKASS WIQEDSCPDY MLKSEECLKK ERERVAHYLH SSSEPKLVEK VQHELLVVFA SQLLEKEHSG CRALLRDDKV DDLSRMYRLY HKILRGLEPV
301: ANIFKQHVTA EGNALVQQAE DTATNQVANT ASVQEQVLIR KVIELHDKYM VYVTECFQNH TLFHKALKEA FEIFCNKTVA GSSSAELLAT FCDNILKKGG
401: SEKLSDEAIE DTLEKVVKLL AYISDKDLFA EFYRKKLARR LLFDRSANDD HERSILTKLK QQCGGQFTSK MEGMVTDLTL ARENQNSFED YLGSNPAANP
501: GIDLTVTVLT TGFWPSYKSF DINLPSEMIK CVEVFKGFYE TKTKHRKLTW IYSLGTCHIN GKFDQKAIEL IVSTYQAAVL LLFNTTDKLS YTEILAQLNL
601: SHEDLVRLLH SLSCAKYKIL LKEPNTKTVS QNDAFEFNSK FTDRMRRIKI PLPPVDERKK VVEDVDKDRR YAIDAAIVRI MKSRKVLGHQ QLVSECVEQL
701: SRMFKPDIKA IKKRMEDLIT RDYLERDKEN PNMFRYLA

Arabidopsis Description

CUL1AT4G02570 protein [Source:UniProtKB/TrEMBL;Acc:B9DGE3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.