Factsheet for Solyc01g067120.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400085888	Potato	cytosol	27.38	33.33
Solyc01g067200.1.1	Tomato	cytosol	36.9	32.29
Solyc01g067260.2.1	Tomato	plastid	29.76	23.92
Solyc06g008080.1.1	Tomato	cytosol	36.31	19.93
Solyc01g099290.2.1	Tomato	cytosol	25.0	15.79
Solyc01g067100.2.1	Tomato	cytosol	44.64	10.11
Solyc06g084520.2.1	Tomato	cytosol	44.05	10.0
Solyc09g074680.2.1	Tomato	cytosol	41.67	9.46
Solyc09g010050.1.1	Tomato	cytosol	39.29	8.98
Solyc06g008710.1.1	Tomato	cytosol	30.36	6.86
Solyc01g067270.2.1	Tomato	cytosol	6.55	4.8
Solyc01g010820.2.1	Tomato	cytosol	20.24	4.63
Solyc02g021470.2.1	Tomato	cytosol, nucleus, plastid	19.05	4.08
Solyc02g070460.2.1	Tomato	plastid	19.05	3.99
Solyc02g087900.2.1	Tomato	cytosol	17.26	3.96
Solyc01g067210.2.1	Tomato	cytosol	10.71	3.16
Solyc05g018040.1.1	Tomato	cytosol	2.38	1.59
Solyc01g067170.1.1	Tomato	mitochondrion, plastid	0.0	0.0
Solyc01g067140.1.1	Tomato	cytosol	0.0	0.0
Os03t0786800-01	Rice	cytosol, plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.20.1310.10	MapMan:35.1	InterPro:Cullin_N	InterPro:Cullin_repeat-like_dom_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	GO:GO:0031461	GO:GO:0031625	GO:GO:0042787	GO:GO:0061630
UniProt:K4AWW1	PFAM:PF00888	PANTHER:PTHR11932	PANTHER:PTHR11932:SF83	SUPFAM:SSF74788	EnsemblPlantsGene:Solyc01g067120.2
EnsemblPlants:Solyc01g067120.2.1	UniParc:UPI0002762D56	:	:	:	:

Description

No Description!

Coordinates

chr1:-:75482598..75485385

Molecular Weight (calculated)

19775.8 Da

IEP (calculated)

8.418

GRAVY (calculated)

-0.489

Length

168 amino acids

Sequence
(BLAST)

001: MSNLKPTLSF EQGWPILQEE AINKVILLVE EGHTSNQFTS EEYMHLYTTV YNMCDNNPAG PEAQKLYQKY KKSIEDYVST KVVPSIQGKK DDVLLHELVK
101: RWNNHKIITR WLFRFFHYLD RHLVPRRNLP SLQETSHLTF YELVVKYELL AVHASKLEEK KQINLGAA

Best Arabidopsis Sequence Match ( AT4G02570.1 )
(BLAST)

001: MERKTIDLEQ GWDYMQTGIT KLKRILEGLN EPAFDSEQYM MLYTTIYNMC TQKPPHDYSQ QLYDKYREAF EEYINSTVLP ALREKHDEFM LRELFKRWSN
101: HKVMVRWLSR FFYYLDRYFI ARRSLPPLNE VGLTCFRDLV YNELHSKVKQ AVIALVDKER EGEQIDRALL KNVLDIYVEI GMGQMERYEE DFESFMLQDT
201: SSYYSRKASS WIQEDSCPDY MLKSEECLKK ERERVAHYLH SSSEPKLVEK VQHELLVVFA SQLLEKEHSG CRALLRDDKV DDLSRMYRLY HKILRGLEPV
301: ANIFKQHVTA EGNALVQQAE DTATNQVANT ASVQEQVLIR KVIELHDKYM VYVTECFQNH TLFHKALKEA FEIFCNKTVA GSSSAELLAT FCDNILKKGG
401: SEKLSDEAIE DTLEKVVKLL AYISDKDLFA EFYRKKLARR LLFDRSANDD HERSILTKLK QQCGGQFTSK MEGMVTDLTL ARENQNSFED YLGSNPAANP
501: GIDLTVTVLT TGFWPSYKSF DINLPSEMIK CVEVFKGFYE TKTKHRKLTW IYSLGTCHIN GKFDQKAIEL IVSTYQAAVL LLFNTTDKLS YTEILAQLNL
601: SHEDLVRLLH SLSCAKYKIL LKEPNTKTVS QNDAFEFNSK FTDRMRRIKI PLPPVDERKK VVEDVDKDRR YAIDAAIVRI MKSRKVLGHQ QLVSECVEQL
701: SRMFKPDIKA IKKRMEDLIT RDYLERDKEN PNMFRYLA

Arabidopsis Description

CUL1AT4G02570 protein [Source:UniProtKB/TrEMBL;Acc:B9DGE3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.