Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 4
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH11182 | Soybean | cytosol, plastid | 93.79 | 57.49 |
| KRH58640 | Soybean | cytosol | 84.27 | 52.52 |
| VIT_10s0003g03710.t01 | Wine grape | cytosol | 85.3 | 51.37 |
| KRH42547 | Soybean | cytosol | 80.95 | 50.85 |
| Solyc02g021470.2.1 | Tomato | cytosol, nucleus, plastid | 81.37 | 50.06 |
| Bra022023.1-P | Field mustard | plastid | 75.16 | 46.24 |
| CDY43957 | Canola | cytosol | 74.12 | 46.13 |
| Solyc02g070460.2.1 | Tomato | plastid | 76.4 | 46.01 |
| CDY33461 | Canola | cytosol | 72.46 | 45.99 |
| CDX87735 | Canola | cytosol | 73.91 | 45.77 |
| CDY03235 | Canola | plastid | 74.74 | 45.7 |
| Bra025031.1-P | Field mustard | cytosol | 71.84 | 45.66 |
| CDX77644 | Canola | cytosol | 72.46 | 45.63 |
| CDY35152 | Canola | plastid | 74.12 | 45.55 |
| Bra017569.1-P | Field mustard | plastid | 73.91 | 45.42 |
| AT5G46210.1 | Thale cress | cytosol | 73.5 | 44.82 |
| GSMUA_Achr4P22850_001 | Banana | cytosol | 74.12 | 44.58 |
| TraesCS5A01G425300.1 | Wheat | cytosol | 63.77 | 43.32 |
| EER93338 | Sorghum | plastid | 72.46 | 41.97 |
| Zm00001d034361_P001 | Maize | cytosol, plastid | 71.84 | 41.71 |
| GSMUA_Achr7P01270_001 | Banana | cytosol | 75.36 | 41.6 |
| TraesCS5B01G427400.1 | Wheat | cytosol | 68.94 | 41.47 |
| TraesCS5D01G433700.3 | Wheat | cytosol, plastid | 70.39 | 40.96 |
| HORVU5Hr1G103580.2 | Barley | plastid | 70.6 | 40.94 |
| Zm00001d013116_P002 | Maize | plastid | 71.43 | 40.12 |
| KRH45896 | Soybean | cytosol | 30.85 | 20.36 |
| KRG99095 | Soybean | cytosol | 30.64 | 20.22 |
| KRG93520 | Soybean | cytosol | 30.23 | 19.92 |
| KRH18483 | Soybean | cytosol | 29.81 | 19.65 |
| KRH70713 | Soybean | cytosol | 28.36 | 18.84 |
| KRH15695 | Soybean | cytosol | 13.04 | 17.26 |
| KRH02236 | Soybean | cytosol, nucleus | 21.74 | 14.11 |
| KRH50876 | Soybean | endoplasmic reticulum | 21.74 | 14.11 |
| KRH12127 | Soybean | cytosol | 21.74 | 14.11 |
| KRH37131 | Soybean | cytosol, nucleus | 21.74 | 14.11 |
| KRH68142 | Soybean | cytosol | 21.33 | 13.9 |
| KRG96405 | Soybean | cytosol | 21.12 | 13.82 |
| KRH21073 | Soybean | cytosol | 0.41 | 0.7 |
Protein Annotations
| Gene3D:1.20.1310.10 | MapMan:35.1 | UniProt:A0A0R0GS02 | EMBL:ACUP02008337 | InterPro:Cullin_N | InterPro:Cullin_homology |
| InterPro:Cullin_homology_sf | InterPro:Cullin_repeat-like_dom_sf | EnsemblPlantsGene:GLYMA_13G218500 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0031625 | GO:GO:0042787 | GO:GO:0061630 | GO:GO:0080008 | InterPro:IPR016158 | EnsemblPlants:KRH21072 |
| ProteinID:KRH21072 | ProteinID:KRH21072.1 | PFAM:PF00888 | PFscan:PS50069 | PANTHER:PTHR11932 | PANTHER:PTHR11932:SF27 |
| SUPFAM:SSF74788 | SUPFAM:SSF75632 | UniParc:UPI0006EE0376 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr13:+:33189453..33200664
Molecular Weight (calculated)
55025.5 Da
IEP (calculated)
6.891
GRAVY (calculated)
-0.303
Length
483 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLPTKRSST AGSSLSPPPP MKKAKSLLLR SSSDDHDAVL DPSSMPLDDD LPNARAANLA RKKATPPQPA KKLLIKLHKA KPTLPTNFEE DTWAKLKSAI
101: CAIFLKQPNS CDLEKLYQAV NDLCLYKMGG NLYQRIEKEC EAHISAALQS LVGQSPDLVV FLSLVERCWQ DLCDQMLMIR GIALYLDRTY VKQTANVRSL
201: WDMGLQLFRK HLSLSPEVEH KTVTGLLRMI ESERKGEAVD RTLLNHLLKM FTALGIYAES FEKPFLECTS EFYAAEGVKY MQQSDVPDYL KHVEIRLQEE
301: HERCLIYLDA STRKPLIATA EKQLLERHIP AILDKGFAML MDGNRIEDLQ RMYSLFSRVN ALESLRQAIS SYIRRTGQGI VLDEEKDKDM VSSLLEFKAS
401: LDTTWEESFS KNEAFCNTIK DSFEHLINLR QNRPAELIAK FLDEKLRAGN KGTSEEELEG TLDKVLVLFR FIQVCLVFHW WSS
101: CAIFLKQPNS CDLEKLYQAV NDLCLYKMGG NLYQRIEKEC EAHISAALQS LVGQSPDLVV FLSLVERCWQ DLCDQMLMIR GIALYLDRTY VKQTANVRSL
201: WDMGLQLFRK HLSLSPEVEH KTVTGLLRMI ESERKGEAVD RTLLNHLLKM FTALGIYAES FEKPFLECTS EFYAAEGVKY MQQSDVPDYL KHVEIRLQEE
301: HERCLIYLDA STRKPLIATA EKQLLERHIP AILDKGFAML MDGNRIEDLQ RMYSLFSRVN ALESLRQAIS SYIRRTGQGI VLDEEKDKDM VSSLLEFKAS
401: LDTTWEESFS KNEAFCNTIK DSFEHLINLR QNRPAELIAK FLDEKLRAGN KGTSEEELEG TLDKVLVLFR FIQVCLVFHW WSS
001: MKRSISPDPF SSTKSPKLVH HSPDDGGAEG NPYRLPFTLS DENLSCLPIS QAREPPPIFN LDPNSVKDTQ DRNKLYLAKA WDLLKPAIKI ILDDDEYKKP
101: GDVLCFTTIF RAVKRACLGD PRQSELVFNL VKHECEPHIA ELIQSLEKNC SGSDDPSVFL PHVYNRWLDF KRKMSLVSDV AMYQTLNGLT LWDVGQKLFH
201: KQLSMAPQLQ DQVITGILRL ITDERLGKAA NNTSDLLKNL MDMFRMQWQC TYVYKDPFLD STSKFYAEEA EQVLQRSDIS HYLKYVERTF LAEEEKCDKH
301: YFFFSSSRSR LMKVLKSQLL EAHSSFLEEG FMLLMDESLI DDLRRMYRLF SMVDSEDYID RILRAYILAK GEGARQEGSL QELHTSIDKI WHQCFGQDDL
401: LDKTIRDCFE GFGLHVPGEF SDQLQWIDDD DDED
101: GDVLCFTTIF RAVKRACLGD PRQSELVFNL VKHECEPHIA ELIQSLEKNC SGSDDPSVFL PHVYNRWLDF KRKMSLVSDV AMYQTLNGLT LWDVGQKLFH
201: KQLSMAPQLQ DQVITGILRL ITDERLGKAA NNTSDLLKNL MDMFRMQWQC TYVYKDPFLD STSKFYAEEA EQVLQRSDIS HYLKYVERTF LAEEEKCDKH
301: YFFFSSSRSR LMKVLKSQLL EAHSSFLEEG FMLLMDESLI DDLRRMYRLF SMVDSEDYID RILRAYILAK GEGARQEGSL QELHTSIDKI WHQCFGQDDL
401: LDKTIRDCFE GFGLHVPGEF SDQLQWIDDD DDED
Arabidopsis Description
Cullin-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ75]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.