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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:nucleus
PProwler:mitochondrion
TargetP:mitochondrion
YLoc:cytosol
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI

Inferred distinct locusB in Crop

locusBlocations
KRH02231
KRH02663
KRH02681
KRH11182
KRH12069
KRH12132
KRH12797
KRH15046
KRH15950
KRH16085
KRH17028
KRH18185
KRH19216
KRH19247
KRH21072
KRH21073
KRH24317
KRH24483
KRH27796
KRH29002
KRH29472
KRH31954
KRH37088
KRH37127
KRH37745
KRH42369
KRH42547
KRH42820
KRH50884
KRH51535
KRH52095
KRH52554
KRH58491
KRH58640
KRH60850
KRH61410
KRH61892
KRH71020
KRH71501
KRH72217
KRH72668
KRH72670
KRH73094
KRH75181
KRH77746

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G05420.1 KRH52095 AT1G19750.1 20622147
AT4G05420.1 KRH61410 AT1G19750.1 20622147
AT4G05420.1 KRH12797 AT1G65030.1 18223036
AT4G05420.1 KRH37745 AT1G65030.1 18223036
AT4G05420.1 KRH71020 AT1G80670.1 18223036
AT4G05420.1 KRH75181 AT1G80670.1 18223036
AT4G05420.1 KRH02681 AT2G19430.1 18223036
AT4G05420.1 KRH19216 AT2G19430.1 18223036
AT4G05420.1 KRH72217 AT2G19430.1 18223036
AT4G05420.1 KRH42820 AT3G13550.1 16844902
AT4G05420.1 KRH31954 AT4G03020.1 21798944
AT4G05420.1 KRH71501 AT4G03020.1 21798944
AT4G05420.1 KRH15950 AT4G10180.1 16792691
AT4G05420.1 KRH18185 AT4G10180.1 16792691
AT4G05420.1 KRH27796 AT4G10180.1 16792691
AT4G05420.1 KRH77746 AT4G10180.1 16792691
AT4G05420.1 KRH02231 AT4G15730.1 21798944
AT4G05420.1 KRH12132 AT4G15730.1 21798944
AT4G05420.1 KRH37127 AT4G15730.1 21798944
AT4G05420.1 KRH50884 AT4G15730.1 21798944
AT4G05420.1 KRH12069 AT4G15900.1 18223036
AT4G05420.1 KRH37088 AT4G15900.1 18223036
AT4G05420.1 KRH15046 AT4G28450.1 18223036
AT4G05420.1 KRH73094 AT4G28450.1 18223036
AT4G05420.1 KRH02663 AT4G29830.1 18223036
AT4G05420.1 KRH19247 AT4G29830.1 18223036
AT4G05420.1 KRH16085 AT4G31160.1 18552200
AT4G05420.1 KRH52554 AT4G31160.1 18552200
AT4G05420.1 KRH61892 AT4G31160.1 18552200
AT4G05420.1 KRH24483 AT4G34460.1 18223036
AT4G05420.1 KRH29472 AT4G34460.1 18223036
AT4G05420.1 KRH51535 AT4G34460.1 18223036
AT4G05420.1 KRH60850 AT4G34460.1 18223036
AT4G05420.1 KRH24317 AT4G35050.1 18223036
AT4G05420.1 KRH29002 AT4G35050.1 18223036
AT4G05420.1 KRH11182 AT5G46210.1 16792691
AT4G05420.1 KRH21072 AT5G46210.1 16792691
AT4G05420.1 KRH21073 AT5G46210.1 16792691
AT4G05420.1 KRH42547 AT5G46210.1 16792691
AT4G05420.1 KRH58640 AT5G46210.1 16792691
AT4G05420.1 KRH11182 AT5G46210.1 16844902
AT4G05420.1 KRH21072 AT5G46210.1 16844902
AT4G05420.1 KRH21073 AT5G46210.1 16844902
AT4G05420.1 KRH42547 AT5G46210.1 16844902
AT4G05420.1 KRH58640 AT5G46210.1 16844902
AT4G05420.1 KRH11182 AT5G46210.1 18223036
AT4G05420.1 KRH21072 AT5G46210.1 18223036
AT4G05420.1 KRH21073 AT5G46210.1 18223036
AT4G05420.1 KRH42547 AT5G46210.1 18223036
AT4G05420.1 KRH58640 AT5G46210.1 18223036
AT4G05420.1 KRH11182 AT5G46210.1 18551167
AT4G05420.1 KRH21072 AT5G46210.1 18551167
AT4G05420.1 KRH21073 AT5G46210.1 18551167
AT4G05420.1 KRH42547 AT5G46210.1 18551167
AT4G05420.1 KRH58640 AT5G46210.1 18551167
AT4G05420.1 KRH42369 AT5G58230.1 21240189
AT4G05420.1 KRH58491 AT5G58230.1 21240189
AT4G05420.1 KRH17028 AT5G58760.1 16792691
AT4G05420.1 KRH72668 AT5G58760.1 16792691
AT4G05420.1 KRH72670 AT5G58760.1 16792691
AT4G05420.1 KRH17028 AT5G58760.1 18551167
AT4G05420.1 KRH72668 AT5G58760.1 18551167
AT4G05420.1 KRH72670 AT5G58760.1 18551167
AT4G05420.1 KRH17028 AT5G58760.1 21240189
AT4G05420.1 KRH72668 AT5G58760.1 21240189
AT4G05420.1 KRH72670 AT5G58760.1 21240189
AT4G21100.1 KRH11182 AT5G46210.1 16792691
AT4G21100.1 KRH21072 AT5G46210.1 16792691
AT4G21100.1 KRH21073 AT5G46210.1 16792691
AT4G21100.1 KRH42547 AT5G46210.1 16792691
AT4G21100.1 KRH58640 AT5G46210.1 16792691
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH43086 Soybean nucleus 31.66 93.1
KRH59212 Soybean cytosol, nucleus 77.05 86.3
CDY68484 Canola cytosol, endoplasmic reticulum, vacuole 74.87 83.55
CDY69266 Canola nucleus 76.38 83.21
HORVU7Hr1G056610.1 Barley cytosol 18.26 54.77
VIT_10s0003g04360.t01 Wine grape cytosol, nucleus, plasma membrane 91.96 50.41
AT4G05420.1 Thale cress cytosol, nucleus, peroxisome 87.27 47.89
Bra029577.1-P Field mustard nucleus, peroxisome, plastid 86.93 47.79
Solyc02g021650.2.1 Tomato nucleus 87.44 47.67
GSMUA_Achr8P07200_001 Banana cytosol, nucleus, plasma membrane 86.43 47.38
AT4G21100.1 Thale cress nucleus 83.92 46.05
Zm00001d039165_P046 Maize nucleus 82.75 45.2
KXG22678 Sorghum nucleus 82.41 45.18
TraesCSU01G002300.1 Wheat golgi, plastid 82.08 44.95
TraesCS1B01G473400.1 Wheat nucleus 82.08 44.95
PGSC0003DMT400009595 Potato nucleus 19.6 44.83
CDY57060 Canola cytosol, nucleus, plasma membrane 82.75 44.79
TraesCS1D01G445700.1 Wheat unclear 81.74 44.77
Zm00001d009745_P023 Maize cytosol, nucleus, plasma membrane, plastid 80.74 43.86
CDX76416 Canola cytosol 81.74 43.26
HORVU1Hr1G094530.1 Barley nucleus, plastid 82.41 43.01
Bra020884.1-P Field mustard cytosol 81.74 38.07
TraesCS3B01G240600.1 Wheat cytosol 65.49 37.81
TraesCS3A01G210100.2 Wheat nucleus 64.82 35.6
HORVU3Hr1G050820.11 Barley plastid 66.33 34.98
CDY54326 Canola cytosol 9.21 24.02
KRH36214 Soybean nucleus 23.12 11.37
KRG92964 Soybean nucleus 23.12 11.37
KRH68075 Soybean nucleus, plastid 18.26 7.86
KRG96340 Soybean nucleus, plastid 18.26 7.86
KRH59213 Soybean cytosol, plasma membrane, plastid 5.7 6.8
CDY50606 Canola golgi, mitochondrion, plasma membrane 0.34 0.63
HORVU7Hr1G056620.1 Barley cytosol 0.0 0.0
CDY69930 Canola plastid 0.0 0.0
CDY70585 Canola plastid 0.0 0.0
Protein Annotations
MapMan:14.6.1.3.1MapMan:19.2.2.8.3.2Gene3D:2.130.10.10MapMan:26.1.1.3.2Gene3D:3.30.980.30UniProt:A0A0R0HF88
EMBL:ACUP02007199InterPro:Cleavage/polyA-sp_fac_asu_CInterPro:DDB1EnsemblPlantsGene:GLYMA_12G078400GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003684GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006259GO:GO:0006281GO:GO:0006289
GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0019538
GO:GO:0031461GO:GO:0043161InterPro:IPR015943EnsemblPlants:KRH25071ProteinID:KRH25071ProteinID:KRH25071.1
PFAM:PF03178PFAM:PF10433PANTHER:PTHR10644PANTHER:PTHR10644:SF3InterPro:Quinoprotein_ADH-like_supfamSUPFAM:SSF50998
UniParc:UPI0006EDB23AInterPro:WD40/YVTN_repeat-like_dom_sf::::
Description
hypothetical protein
Coordinates
chr12:-:6098489..6102396
Molecular Weight (calculated)
66748.5 Da
IEP (calculated)
5.862
GRAVY (calculated)
-0.209
Length
597 amino acids
Sequence
(BLAST)
001: LQVTSSSVRL VSSNPRELRN EWHAPSGYSV NVATANATQV LLATGGGHLV YLEIGDGILQ EVKHAQLEYE ISCLDINPIG ENPNHSNLAA VGMWTDISVR
101: IFSLPDLSLI TKEQLGGEII PRSVLLCAFE GTSYLLCALG DGHLLNFMLN ISTGELTDRK KVSLGTQPIT LRTFSSKNTT HVFAASDRPT VIYSSNKKLL
201: YSNVNLKEVS HMCPFNSAAF PDSLAIAKEG ELTIGTIDDI QKLHIRSIPL GEHARRICHQ EQSRTFAICS LKYNPASGED SEMHFVRLLD DQTFDCSFSD
301: DNNVYYCVGT AYVLPEENEP TKGRILVFAV EDGKLQLIAE KETKGAVYCL MAFNGKLLAA INQKIHLYKW VLWDDGTHEL QSECGHHGHI LALYVQTRGD
401: FIVVGDRMKS ISLLIYKHEE GAIEERARDY NANWMSENSF NLFTVRKNSE GATDEERGRL EVVGEYHLGE FVNRFRHGSL VMRLPDSDVG QIPTVIYGTI
501: NGVIGVIASL PHEQYVFLEK LQSNLRKVIK GVGGLSHEQW RSFNNEKKTV EARNFLDGDL IESFLDLNRS KMDEISKAVD VSVEELCKRV EELTRLH
Best Arabidopsis Sequence Match ( AT4G05420.2 )
(BLAST)
0001: MSSWNYVVTA HKPTSVTHSC VGNFTSPQEL NLIVAKCTRI EIHLLTPQGL QPMLDVPIYG RIATLELFRP HGEAQDFLFI ATERYKFCVL QWDPESSELI
0101: TRAMGDVSDR IGRPTDNGQV IPFDNKGQLK EAFNIRLEEL QVLDIKFLFG CAKPTIAVLY QDNKDARHVK TYEVSLKDKD FVEGPWSQNS LDNGADLLIP
0201: VPPPLCGVLI IGEETIVYCS ASAFKAIPIR PSITKAYGRV DVDGSRYLLG DHAGMIHLLV ITHEKEKVTG LKIELLGETS IASTISYLDN AVVFVGSSYG
0301: DSQLVKLNLH PDAKGSYVEV LERYINLGPI VDFCVVDLER QGQGQVVTCS GAFKDGSLRV VRNGIGINEQ ASVELQGIKG MWSLKSSIDE AFDTFLVVSF
0401: ISETRILAMN LEDELEETEI EGFLSQVQTL FCHDAVYNQL VQVTSNSVRL VSSTTRELRD EWHAPAGFTV NVATANASQV LLATGGGHLV YLEIGDGKLT
0501: EVQHALLEYE VSCLDINPIG DNPNYSQLAA VGMWTDISVR IFSLPELTLI TKEQLGGEII PRSVLLCAFE GISYLLCALG DGHLLNFQMD TTTGQLKDRK
0601: KVSLGTQPIT LRTFSSKSAT HVFAASDRPT VIYSSNKKLL YSNVNLKEVS HMCPFNSAAF PDSLAIAREG ELTIGTIDDI QKLHIRTIPL GEHARRICHQ
0701: EQTRTFGICS LGNQSNSEES EMHFVRLLDD QTFEFMSTYP LDSFEYGCSI LSCSFTEDKN VYYCVGTAYV LPEENEPTKG RILVFIVEDG RLQLIAEKET
0801: KGAVYSLNAF NGKLLAAINQ KIQLYKWMLR DDGTRELQSE CGHHGHILAL YVQTRGDFIV VGDLMKSISL LLYKHEEGAI EERARDYNAN WMSAVEILDD
0901: DIYLGAENNF NLLTVKKNSE GATDEERGRL EVVGEYHLGE FVNRFRHGSL VMRLPDSEIG QIPTVIFGTV NGVIGVIASL PQEQYTFLEK LQSSLRKVIK
1001: GVGGLSHEQW RSFNNEKRTA EARNFLDGDL IESFLDLSRN KMEDISKSMN VQVEELCKRV EELTRLH
Arabidopsis Description
DDB1ADDB1A [Source:UniProtKB/TrEMBL;Acc:A0A178UYD4]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.