Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KRH20463 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G15730.1 | KRH20463 | AT4G04950.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH37127 | Soybean | nucleus | 75.34 | 76.11 |
| KRH50884 | Soybean | nucleus | 43.94 | 46.21 |
| KRH02231 | Soybean | nucleus | 43.35 | 45.11 |
| PGSC0003DMT400005774 | Potato | cytosol | 2.07 | 38.04 |
| PGSC0003DMT400039034 | Potato | nucleus | 6.09 | 32.49 |
| PGSC0003DMT400031270 | Potato | nucleus | 6.15 | 32.4 |
| Os05t0371100-00 | Rice | cytosol | 2.78 | 32.19 |
| PGSC0003DMT400039039 | Potato | nucleus | 6.09 | 32.09 |
| PGSC0003DMT400005780 | Potato | nucleus | 5.97 | 31.96 |
| Solyc12g017610.1.1 | Tomato | nucleus | 5.91 | 30.86 |
| Solyc08g067570.1.1 | Tomato | nucleus | 5.91 | 30.86 |
| VIT_05s0020g01570.t01 | Wine grape | cytosol, mitochondrion, plastid | 28.09 | 29.18 |
| Solyc08g067490.1.1 | Tomato | nucleus | 5.26 | 28.8 |
| Bra033505.1-P | Field mustard | nucleus | 15.91 | 28.74 |
| CDY66331 | Canola | nucleus | 15.91 | 28.74 |
| CDY54298 | Canola | nucleus | 15.91 | 28.62 |
| Solyc01g067600.2.1 | Tomato | nucleus | 26.67 | 27.33 |
| KRG96403 | Soybean | nucleus | 27.14 | 27.31 |
| AT4G15730.1 | Thale cress | nucleus | 17.03 | 27.2 |
| KRH68140 | Soybean | nucleus | 26.79 | 27.11 |
| Os03t0347300-01 | Rice | cytosol, nucleus | 14.84 | 27.08 |
| GSMUA_Achr5P08000_001 | Banana | nucleus | 22.65 | 27.07 |
| PGSC0003DMT400065641 | Potato | nucleus | 2.9 | 26.34 |
| Solyc08g067140.1.1 | Tomato | nucleus | 4.08 | 26.04 |
| PGSC0003DMT400005776 | Potato | nucleus | 3.9 | 25.58 |
| KXG39393 | Sorghum | mitochondrion | 20.22 | 25.54 |
| TraesCS2D01G118500.1 | Wheat | nucleus | 23.3 | 24.94 |
| TraesCS2B01G135800.1 | Wheat | nucleus | 23.24 | 24.86 |
| TraesCS2A01G116600.1 | Wheat | nucleus | 23.24 | 24.86 |
| GSMUA_Achr3P08980_001 | Banana | nucleus | 23.95 | 24.64 |
| OQU90452 | Sorghum | nucleus | 23.24 | 24.59 |
| Zm00001d029134_P004 | Maize | mitochondrion | 19.75 | 24.47 |
| Zm00001d022481_P019 | Maize | nucleus | 22.89 | 24.29 |
| GSMUA_Achr8P21920_001 | Banana | nucleus | 22.59 | 24.1 |
| Zm00001d007121_P024 | Maize | nucleus | 22.59 | 24.0 |
| Solyc08g067590.1.1 | Tomato | nucleus | 1.66 | 23.33 |
| TraesCS1B01G246700.4 | Wheat | nucleus | 19.93 | 23.08 |
| TraesCS1D01G235200.1 | Wheat | nucleus | 19.99 | 22.99 |
| Os07t0669800-01 | Rice | nucleus | 14.13 | 22.81 |
| TraesCS1A01G237200.3 | Wheat | nucleus | 19.57 | 22.44 |
| HORVU1Hr1G058250.1 | Barley | nucleus | 19.34 | 22.26 |
| Zm00001d010490_P005 | Maize | nucleus | 18.15 | 21.59 |
| OQU77880 | Sorghum | nucleus | 18.15 | 21.54 |
Protein Annotations
| EMBL:ACUP02009269 | EnsemblPlants:KRH12132 | EnsemblPlantsGene:GLYMA_15G154200 | EntrezGene:102667636 | Gene3D:3.30.40.100 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0008270 | InterPro:IPR011124 | InterPro:Znf_CW | ncoils:Coil | PANTHER:PTHR23336 |
| PANTHER:PTHR23336:SF14 | PFAM:PF07496 | PFscan:PS51050 | ProteinID:KRH12132 | ProteinID:KRH12132.1 | SEG:seg |
| UniParc:UPI0003DE7F0F | UniProt:A0A0R0GCB3 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr15:-:12830048..12839780
Molecular Weight (calculated)
186351.0 Da
IEP (calculated)
8.774
GRAVY (calculated)
-0.832
Length
1691 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVEMKENTEL EEGEACYYNG DDEANIDPDS FSYIDEKIQH FLGHFQKDFE GGVSAENLGA KFGGYGSFLP TQERSPCLWS HPRTPQRNHS SPKSNINLHM
0101: EVVSHNTKAS SNVPHARPEN ASHSSYSLRD LREASVNDSV KKERGISSSD TAERCTLKDD TTKKTGNSTD QRPLKFRIKM KSNILAQKNA EIYSGLGLDN
0201: SPSSSMGNSP VESEGMPPVS QENAEGSPTG IIQVMTSFPI LGCVLVSPLH ESLLYMMKNE KVISDSKYLS SLKGHQDTCS MSTDESDSFV GNEHLKKRTV
0301: RIVRQSEKQL ELKHTNGTFS EKDLTLHTKK RLGNRTPDCK DFLSNDLKCT PLSSSICDAG ETAEVTAKAF EASKEFNENG VQGRMVPVEA LKEESLESIS
0401: GQDFEKTEKQ NSGNGFMKNA LEHKLENSRK DNYTDPMNNN TRNTFMISNK FECDAVKHKV DHKYENHQKV KAVSERKTKS KGDQSPRKAE AVARKDSFCG
0501: TSDAMVINKV SAGCDNTSKS KMNKSKSLKG KKFSDSNRDS LRGKKSEQKV DSVAGNGAIK NGNISNGKQS AFGAKVKVRP SCHKVANQLL AGPCIKDTSA
0601: ALLITENSIA PEMISSAGVP QVIAEDWVCC DSCQKWRLLP NGVKPEHLPE KWLCSMLNWL PGMNSCDFSE DETTKALYAS YQMPISNGQN NMQSHGTETA
0701: IGVSSTDALQ YGLNHNMSSS DMLSDRGKKK HVIKEKTMSG INNDVLQFPN SAKTNVQVSG KNRSLNVMNQ HPADLNPMKK MSSSKHLSSL DNMIEEKSVP
0801: IEKEKQVNEG ERKHVKLKRK MDADQYKLGT PKKPKIENVF YADKQLNPGM DLEKVSLYSR NSLATKASGK DMRKHDEYCL SDDVQDSLPV TVKKEGDQAQ
0901: VLSGGGSLDV INGSKSGLMK KRKLKECMDD EKHNNSCSSH GEKHNNSYSS HGEKQYGEEG NASEFRKEKR YRILNKEAKS LTEGDNKLSK GGMRQVCLSG
1001: NRDQMAVGTE VRFVDKGNQP RKHRKNTASL HASDGIGQLG KDLGSRPLSL AATSSSSKVS GSHKAKTYFE DLRGSPVESV TSSPLRAFNS DKNIWAVGGT
1101: SAKDDATKGC LSSVGSRRSV DNREGKLSVK LKAGRISRDL HPASHKLSSI EVRVEDAKDT ARVQAKKSSE LKNSHLLEGG VHVEQPGYCA NGKRYEEKVN
1201: KDNQESEFSW QKSGKVSSLH SKEKDRKSGS HVGTDKMKIS VSETGGYSKK SGKYDSAVDP SNHESGAESK NNAKYISPKS KSEIDCISQK SALRHGPNET
1301: GKQTEIKQRD FENSILKMDA QCSTDNNKPI PWQNLTQDFE GENKANLTES RVGKSKVLSS AVDEVKREAL SVGSRTVPQH QKGGMSNEHH VHVSGNDDMA
1401: KSMRNYADVS NNAGVNYSSG NFAPDQQLTL LSPLRTNSNQ TATDTLKEAA KLKDRADNYK NSGFDFESNE TYFQAGLKFL HGASLLENCH NESSKHGEMS
1501: QMQIFATAAK LFKCCAHEYE THQEMAAAAL SYKCMEVAYM RVVYCKNSST NRDRQELQST LQLVSQGESP SSSASDVDNL NNQAAADKAA LPRGTNTHVA
1601: INQVISARTR PNLVRLLDFT QDIHFVMEAS RKCQSTFAAA NVIMQEARNK DCIASIRSVI DFSFQDVDEL VRLIWTATKA ISRAGLGGTR D
0101: EVVSHNTKAS SNVPHARPEN ASHSSYSLRD LREASVNDSV KKERGISSSD TAERCTLKDD TTKKTGNSTD QRPLKFRIKM KSNILAQKNA EIYSGLGLDN
0201: SPSSSMGNSP VESEGMPPVS QENAEGSPTG IIQVMTSFPI LGCVLVSPLH ESLLYMMKNE KVISDSKYLS SLKGHQDTCS MSTDESDSFV GNEHLKKRTV
0301: RIVRQSEKQL ELKHTNGTFS EKDLTLHTKK RLGNRTPDCK DFLSNDLKCT PLSSSICDAG ETAEVTAKAF EASKEFNENG VQGRMVPVEA LKEESLESIS
0401: GQDFEKTEKQ NSGNGFMKNA LEHKLENSRK DNYTDPMNNN TRNTFMISNK FECDAVKHKV DHKYENHQKV KAVSERKTKS KGDQSPRKAE AVARKDSFCG
0501: TSDAMVINKV SAGCDNTSKS KMNKSKSLKG KKFSDSNRDS LRGKKSEQKV DSVAGNGAIK NGNISNGKQS AFGAKVKVRP SCHKVANQLL AGPCIKDTSA
0601: ALLITENSIA PEMISSAGVP QVIAEDWVCC DSCQKWRLLP NGVKPEHLPE KWLCSMLNWL PGMNSCDFSE DETTKALYAS YQMPISNGQN NMQSHGTETA
0701: IGVSSTDALQ YGLNHNMSSS DMLSDRGKKK HVIKEKTMSG INNDVLQFPN SAKTNVQVSG KNRSLNVMNQ HPADLNPMKK MSSSKHLSSL DNMIEEKSVP
0801: IEKEKQVNEG ERKHVKLKRK MDADQYKLGT PKKPKIENVF YADKQLNPGM DLEKVSLYSR NSLATKASGK DMRKHDEYCL SDDVQDSLPV TVKKEGDQAQ
0901: VLSGGGSLDV INGSKSGLMK KRKLKECMDD EKHNNSCSSH GEKHNNSYSS HGEKQYGEEG NASEFRKEKR YRILNKEAKS LTEGDNKLSK GGMRQVCLSG
1001: NRDQMAVGTE VRFVDKGNQP RKHRKNTASL HASDGIGQLG KDLGSRPLSL AATSSSSKVS GSHKAKTYFE DLRGSPVESV TSSPLRAFNS DKNIWAVGGT
1101: SAKDDATKGC LSSVGSRRSV DNREGKLSVK LKAGRISRDL HPASHKLSSI EVRVEDAKDT ARVQAKKSSE LKNSHLLEGG VHVEQPGYCA NGKRYEEKVN
1201: KDNQESEFSW QKSGKVSSLH SKEKDRKSGS HVGTDKMKIS VSETGGYSKK SGKYDSAVDP SNHESGAESK NNAKYISPKS KSEIDCISQK SALRHGPNET
1301: GKQTEIKQRD FENSILKMDA QCSTDNNKPI PWQNLTQDFE GENKANLTES RVGKSKVLSS AVDEVKREAL SVGSRTVPQH QKGGMSNEHH VHVSGNDDMA
1401: KSMRNYADVS NNAGVNYSSG NFAPDQQLTL LSPLRTNSNQ TATDTLKEAA KLKDRADNYK NSGFDFESNE TYFQAGLKFL HGASLLENCH NESSKHGEMS
1501: QMQIFATAAK LFKCCAHEYE THQEMAAAAL SYKCMEVAYM RVVYCKNSST NRDRQELQST LQLVSQGESP SSSASDVDNL NNQAAADKAA LPRGTNTHVA
1601: INQVISARTR PNLVRLLDFT QDIHFVMEAS RKCQSTFAAA NVIMQEARNK DCIASIRSVI DFSFQDVDEL VRLIWTATKA ISRAGLGGTR D
0001: MGEDYELEEG EMNCSSDEAV VDLDVDLSYI DKKVQNVLGH LQKGFGEEAR DRFGPEIFDY GSFLPTYKRL PAVPSCQRSS LGNHAVQRIS NSLPGKNVVQ
0101: KFQSPPATSC KLVRNQDPQN YQTSGSLLAQ APGKVPINKG NARTPANDLP HNKPIRVRIK MGSEILSQSV AMVCKDLGLD GSPNSPPRIS QDDSSRMLPH
0201: TSLGKTSESP SRILQEMTAI SVPEDLLMSP LPDSLLLVKD KKKQYTLLDN QPMIKTGKKS SIQIQNKFSD VLCCEKTPIG RRRKEVDCFH ATTWNETKKH
0301: KVLSTGQLAR DNSACGLGGA SLTTDGFTTK SNLQEGCRKD GESDPRVANK IKFVGLHAVK EKKTCPTKLQ QNRSKYRIGD KVLSKMPLKD AAYIGHNSMD
0401: TGFDFAVAPS STSVDLDYWA QCESCEKWRL LPYDLNTEKL PDKWLCSMQT WLPGMNHCGV SEEETTNAIK SFHASEGHGP DTGVKLLSDV RNADKIYQPL
0501: TSGSLPNPIE KKSNVEDLSQ GVSSNILVDA AKPMRSNPHI FKNKNMKLPG ETPTATQISA DLSHDFFQDK IDQKAKRRAA GAGCQIKVKK KKEADKEESD
0601: GSKHIKTGDG NKLARVIKAE EIHWNQDPKW TPAERKRKRH DNDFCTLNVE RDPKKRLLVS KKKPDHKPQL ITASGSLCTK AQGNINSTVR KIRLMGYKQG
0701: KDGKNSKLFA DGEENEPSME KAVTTKISVH ESKANQRNEL FQADCFQEHL NGDASCRYFS GGSGQISGIE TSNSSKVLGS HKSGRMYVEE VKASPVESVS
0801: SSPARSSCPT NDILQEAEKL RKLADCFKSS GFEYEYKEIN FKAALRFLLG ASVLEMCSTD NVEVGKMSHI EAYHTAAKLS ESCAHQYETS QEMAAATLAY
0901: KCTEVACMRL VYGRSLGLSG EWNELQKMVQ MTPQGESPSS SASDVDSFNH QGVIKKSAKT RRGLSHVAGN LLPVARSQLN FVPLLDFTGS MNLAMEASAK
1001: SQNAFKAVTD TSEERKHGDC ISAIKKVVDF SFHDVEALIK MIEVAMDALS SSRFGGPKC
0101: KFQSPPATSC KLVRNQDPQN YQTSGSLLAQ APGKVPINKG NARTPANDLP HNKPIRVRIK MGSEILSQSV AMVCKDLGLD GSPNSPPRIS QDDSSRMLPH
0201: TSLGKTSESP SRILQEMTAI SVPEDLLMSP LPDSLLLVKD KKKQYTLLDN QPMIKTGKKS SIQIQNKFSD VLCCEKTPIG RRRKEVDCFH ATTWNETKKH
0301: KVLSTGQLAR DNSACGLGGA SLTTDGFTTK SNLQEGCRKD GESDPRVANK IKFVGLHAVK EKKTCPTKLQ QNRSKYRIGD KVLSKMPLKD AAYIGHNSMD
0401: TGFDFAVAPS STSVDLDYWA QCESCEKWRL LPYDLNTEKL PDKWLCSMQT WLPGMNHCGV SEEETTNAIK SFHASEGHGP DTGVKLLSDV RNADKIYQPL
0501: TSGSLPNPIE KKSNVEDLSQ GVSSNILVDA AKPMRSNPHI FKNKNMKLPG ETPTATQISA DLSHDFFQDK IDQKAKRRAA GAGCQIKVKK KKEADKEESD
0601: GSKHIKTGDG NKLARVIKAE EIHWNQDPKW TPAERKRKRH DNDFCTLNVE RDPKKRLLVS KKKPDHKPQL ITASGSLCTK AQGNINSTVR KIRLMGYKQG
0701: KDGKNSKLFA DGEENEPSME KAVTTKISVH ESKANQRNEL FQADCFQEHL NGDASCRYFS GGSGQISGIE TSNSSKVLGS HKSGRMYVEE VKASPVESVS
0801: SSPARSSCPT NDILQEAEKL RKLADCFKSS GFEYEYKEIN FKAALRFLLG ASVLEMCSTD NVEVGKMSHI EAYHTAAKLS ESCAHQYETS QEMAAATLAY
0901: KCTEVACMRL VYGRSLGLSG EWNELQKMVQ MTPQGESPSS SASDVDSFNH QGVIKKSAKT RRGLSHVAGN LLPVARSQLN FVPLLDFTGS MNLAMEASAK
1001: SQNAFKAVTD TSEERKHGDC ISAIKKVVDF SFHDVEALIK MIEVAMDALS SSRFGGPKC
Arabidopsis Description
At4g15730 [Source:UniProtKB/TrEMBL;Acc:Q8GY51]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.