Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KRH20463 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G15730.1 | KRH20463 | AT4G04950.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH50884 | Soybean | nucleus | 70.15 | 70.9 |
| KRH12132 | Soybean | nucleus | 45.11 | 43.35 |
| KRH37127 | Soybean | nucleus | 44.49 | 43.19 |
| PGSC0003DMT400005774 | Potato | cytosol | 1.85 | 32.61 |
| PGSC0003DMT400039034 | Potato | nucleus | 6.03 | 30.91 |
| PGSC0003DMT400039039 | Potato | nucleus | 5.97 | 30.22 |
| PGSC0003DMT400031270 | Potato | nucleus | 5.97 | 30.22 |
| PGSC0003DMT400005780 | Potato | nucleus | 5.85 | 30.06 |
| Solyc08g067570.1.1 | Tomato | nucleus | 5.91 | 29.63 |
| Os05t0371100-00 | Rice | cytosol | 2.65 | 29.45 |
| Solyc12g017610.1.1 | Tomato | nucleus | 5.85 | 29.32 |
| CDY66331 | Canola | nucleus | 16.31 | 28.31 |
| Bra033505.1-P | Field mustard | nucleus | 16.25 | 28.21 |
| VIT_05s0020g01570.t01 | Wine grape | cytosol, mitochondrion, plastid | 28.12 | 28.07 |
| CDY54298 | Canola | nucleus | 15.94 | 27.55 |
| Solyc08g067490.1.1 | Tomato | nucleus | 5.23 | 27.51 |
| AT4G15730.1 | Thale cress | nucleus | 17.72 | 27.2 |
| Os03t0347300-01 | Rice | cytosol, nucleus | 15.26 | 26.75 |
| Solyc08g067590.1.1 | Tomato | nucleus | 1.97 | 26.67 |
| Solyc01g067600.2.1 | Tomato | nucleus | 26.52 | 26.12 |
| KRG96403 | Soybean | nucleus | 26.71 | 25.82 |
| PGSC0003DMT400065641 | Potato | nucleus | 2.95 | 25.81 |
| KRH68140 | Soybean | nucleus | 26.4 | 25.67 |
| GSMUA_Achr5P08000_001 | Banana | nucleus | 21.97 | 25.23 |
| Solyc08g067140.1.1 | Tomato | nucleus | 4.0 | 24.53 |
| KXG39393 | Sorghum | mitochondrion | 19.69 | 23.9 |
| GSMUA_Achr3P08980_001 | Banana | nucleus | 23.75 | 23.48 |
| OQU90452 | Sorghum | nucleus | 22.89 | 23.28 |
| Zm00001d022481_P019 | Maize | nucleus | 22.77 | 23.23 |
| TraesCS2D01G118500.1 | Wheat | nucleus | 22.52 | 23.16 |
| TraesCS2A01G116600.1 | Wheat | nucleus | 22.52 | 23.15 |
| TraesCS2B01G135800.1 | Wheat | nucleus | 22.46 | 23.09 |
| PGSC0003DMT400005776 | Potato | nucleus | 3.63 | 22.87 |
| Zm00001d007121_P024 | Maize | nucleus | 22.34 | 22.8 |
| Zm00001d029134_P004 | Maize | mitochondrion | 19.08 | 22.71 |
| TraesCS1B01G246700.4 | Wheat | nucleus | 19.51 | 21.71 |
| GSMUA_Achr8P21920_001 | Banana | nucleus | 21.17 | 21.7 |
| TraesCS1D01G235200.1 | Wheat | nucleus | 19.45 | 21.5 |
| Os07t0669800-01 | Rice | nucleus | 13.78 | 21.37 |
| TraesCS1A01G237200.3 | Wheat | nucleus | 19.14 | 21.08 |
| HORVU1Hr1G058250.1 | Barley | nucleus | 18.89 | 20.9 |
| OQU77880 | Sorghum | nucleus | 18.22 | 20.77 |
| Zm00001d010490_P005 | Maize | nucleus | 17.78 | 20.32 |
Protein Annotations
| EMBL:ACUP02010299 | EnsemblPlants:KRH02231 | EnsemblPlantsGene:GLYMA_17G024800 | EntrezGene:100793863 | Gene3D:3.30.40.100 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0008270 | InterPro:IPR011124 | InterPro:Znf_CW | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF14 |
| PFAM:PF07496 | PFscan:PS51050 | ProteinID:KRH02231 | ProteinID:KRH02231.1 | SEG:seg | UniParc:UPI000294BCDF |
| UniProt:K7MJL6 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr17:+:1823329..1833241
Molecular Weight (calculated)
179995.0 Da
IEP (calculated)
8.906
GRAVY (calculated)
-0.824
Length
1625 amino acids
Sequence
(BLAST)
(BLAST)
0001: MQANIEFEEG EAFFCYKDDD DDDNTDLDSL SYIDERIQHA LGHFRKEFEG GVSAGRLGAK FGDYGSFLPT CEHSPPLRSC SKTPQKHNSS PKSPSNLHMA
0101: AAFRNSKALP NMPFSMRVGT ASYEAPPFRN IRVPSADYSV KNTDISSNEV IEKFTLKDCA NKSEILTDQR TLKLRIKVKS DILAKKNAAI YSGLGLDDSP
0201: SPSMENSHEE SEDMPHVSQE TPEESPTSIV QVMTSFTIPG GVLISPLHDS LLYLIRKEKA LGNIKPMSSL NGNSVSINES DSFVGDGHLL KKRKVTVVDQ
0301: SHKQHMNGNC SENDMTLHTK KKLGNRTPDR KDFLSNDLRC TPLSSSICDA GETAEVTVKG FEVSKEVDGV KCRMVSTEAV KEDSLESISG QDFDKIEKQN
0401: TGSGFMKNVL EHKMIISQNN NSTNPKTNSK CNTFAISKRI KCDALKCKVD QDTQKCETNQ EGKVKSESKN ESKGERSPGN VMTLAEKDSI GTSNNAMVND
0501: RKRTSIDVTS LKSKMHKIKS LKVNKVRDCD RDSLKGKKSQ QKVDRINPTD GPTLNKATVN SSLDHVDKSA YRVKGNERPS GNKVVNQLSA GPCVKDAPGA
0601: FPIAENKPTS EMVLSSEAAT PQVIEEDWVC CDSCQKWRLL PMGLKPEQLP EKWLCSMLYW LPGMNRCNIS EEETTKALYA LYQMPISEGQ NNMQSHAAGP
0701: ETGVGSVDAL QLGLNRKKSS SDVMLDRGKK KHGINEKTRS GVNNDMHRLS NNAQESVKNR SLNEMNKQST DSNRIKKSIS KHSSRLNNLI EEKNTPKVKE
0801: KQMNGGDRNH VRLKRKMEDN QHGSGTPKKS KAEDVCYADK PLNPGMEFKK VGLISRNSLP TKASGRNMRK YDDYCWSDDL VDKLVVPVKK GDRAQFSSDD
0901: GSLDATNTRK SGSIKKRKMA DWLDNEKHNK TLSLEGNMQC GKEGNANKKE KKYIVLNTEA KSVTERDDKL IRESGMKRVF SSDSRDEMAI GTEVKSVNKV
1001: QQPRKHNKIV ASYQALDCFD PLSKDLGSGQ LSLAATSSSS KVSGSHKART NVEDVRGSPL ESVTSSPLWT SNMDKHILES GDTSEKHDTR KGGLSKSLNN
1101: REGKLSVKMK ERISYDIHPA HGNYGSSSHH EEKVNKSNKE DALSWQKSGR VTSLRVKEKD RISGSEVSRE KMKVSASDND FHKNGVSYES AVDPNRHASD
1201: TETRNDVKNS SLKSNHKIDN PSKKNSSRHW SNEAGKQTVL KQKDFGNSVL KVDATCSTNR KIISQQNLIQ DFEKENKANQ VCTGSRDGKA KVITSSEDKV
1301: KRETLYVGSR TAPESQRGDM SDGHPFHASG NDVPKFVRNP VDVSCKVGFN CSSESFIPDG QLSESGPVTT NSSKTATSIL EEATKLKDSA DHYKNSGFEF
1401: ESNETYFKSA LKFLHGASLL ESSHGESSKH GEASQMQIYA TTAKLFESCA HKYEKRQEMA AAALAYKCLE VVYMRLVYCK HSSINRDRHE LQSTLQMVSQ
1501: GESPSSSASD IDNLNNLAVA DKATLTRGSN THVPSNQVIS ARNRPNIVRL LDFTQDINLA MEASRKCKTT YMAASLNMED SWNRDCITSI RKVVDFSFQD
1601: VDELVHLVLT ATKAITCAGL GGVRD
0101: AAFRNSKALP NMPFSMRVGT ASYEAPPFRN IRVPSADYSV KNTDISSNEV IEKFTLKDCA NKSEILTDQR TLKLRIKVKS DILAKKNAAI YSGLGLDDSP
0201: SPSMENSHEE SEDMPHVSQE TPEESPTSIV QVMTSFTIPG GVLISPLHDS LLYLIRKEKA LGNIKPMSSL NGNSVSINES DSFVGDGHLL KKRKVTVVDQ
0301: SHKQHMNGNC SENDMTLHTK KKLGNRTPDR KDFLSNDLRC TPLSSSICDA GETAEVTVKG FEVSKEVDGV KCRMVSTEAV KEDSLESISG QDFDKIEKQN
0401: TGSGFMKNVL EHKMIISQNN NSTNPKTNSK CNTFAISKRI KCDALKCKVD QDTQKCETNQ EGKVKSESKN ESKGERSPGN VMTLAEKDSI GTSNNAMVND
0501: RKRTSIDVTS LKSKMHKIKS LKVNKVRDCD RDSLKGKKSQ QKVDRINPTD GPTLNKATVN SSLDHVDKSA YRVKGNERPS GNKVVNQLSA GPCVKDAPGA
0601: FPIAENKPTS EMVLSSEAAT PQVIEEDWVC CDSCQKWRLL PMGLKPEQLP EKWLCSMLYW LPGMNRCNIS EEETTKALYA LYQMPISEGQ NNMQSHAAGP
0701: ETGVGSVDAL QLGLNRKKSS SDVMLDRGKK KHGINEKTRS GVNNDMHRLS NNAQESVKNR SLNEMNKQST DSNRIKKSIS KHSSRLNNLI EEKNTPKVKE
0801: KQMNGGDRNH VRLKRKMEDN QHGSGTPKKS KAEDVCYADK PLNPGMEFKK VGLISRNSLP TKASGRNMRK YDDYCWSDDL VDKLVVPVKK GDRAQFSSDD
0901: GSLDATNTRK SGSIKKRKMA DWLDNEKHNK TLSLEGNMQC GKEGNANKKE KKYIVLNTEA KSVTERDDKL IRESGMKRVF SSDSRDEMAI GTEVKSVNKV
1001: QQPRKHNKIV ASYQALDCFD PLSKDLGSGQ LSLAATSSSS KVSGSHKART NVEDVRGSPL ESVTSSPLWT SNMDKHILES GDTSEKHDTR KGGLSKSLNN
1101: REGKLSVKMK ERISYDIHPA HGNYGSSSHH EEKVNKSNKE DALSWQKSGR VTSLRVKEKD RISGSEVSRE KMKVSASDND FHKNGVSYES AVDPNRHASD
1201: TETRNDVKNS SLKSNHKIDN PSKKNSSRHW SNEAGKQTVL KQKDFGNSVL KVDATCSTNR KIISQQNLIQ DFEKENKANQ VCTGSRDGKA KVITSSEDKV
1301: KRETLYVGSR TAPESQRGDM SDGHPFHASG NDVPKFVRNP VDVSCKVGFN CSSESFIPDG QLSESGPVTT NSSKTATSIL EEATKLKDSA DHYKNSGFEF
1401: ESNETYFKSA LKFLHGASLL ESSHGESSKH GEASQMQIYA TTAKLFESCA HKYEKRQEMA AAALAYKCLE VVYMRLVYCK HSSINRDRHE LQSTLQMVSQ
1501: GESPSSSASD IDNLNNLAVA DKATLTRGSN THVPSNQVIS ARNRPNIVRL LDFTQDINLA MEASRKCKTT YMAASLNMED SWNRDCITSI RKVVDFSFQD
1601: VDELVHLVLT ATKAITCAGL GGVRD
0001: MKLLLILTLI SLTLTRRYRM YLATCKKVSE RKPGTGLIFD YGSFLPTYKR LPAVPSCQRS SLGNHAVQRI SNSLPGKNVV QKFQSPPATS CKLVRNQDPQ
0101: NYQTSGSLLA QAPGKVPINK GNARTPANDL PHNKPIRVRI KMGSEILSQS VAMVCKDLGL DGSPNSPPRI SQDDSSRMLP HTSLGKTSES PSRILQEMTA
0201: ISVPEDLLMS PLPDSLLLVK DKKKQYTLLD NQPMIKTGKK SSIQIQNKFS DVLCCEKTPI GRRRKEVDCF HATTWNETKK HKVLSTGQLA RDNSACGLGG
0301: ASLTTDGFTT KSNLQEGCRK DGESDPRVAN KIKFVGLHAV KEKKTCPTKL QQNRSKYRIG DKVLSKMPLK DAAYIGHNSM DTGFDFAVAP SSTSVDLDYW
0401: AQCESCEKWR LLPYDLNTEK LPDKWLCSMQ TWLPGMNHCG VSEEETTNAI KSFHASEGHG PDTGVKLLSD VRNADKIYQP LTSGSLPNPI EKKSNVEDLS
0501: QGVSSNILVD AAKPMRSNPH IFKNKNMKLP GETPTATQIS ADLSHDFFQD KIDQKAKRRA AGAGCQIKVK KKKEADKEES DGSKHIKTGD GNKLARVIKA
0601: EEIHWNQDPK WTPAERKRKR HDNDFCTLNV ERDPKKRLLV SKKKPDHKPQ LITASGSLCT KAQGNINSTV RKIRLMGYKQ GKDGKNSKLF ADGEENEPSM
0701: EKAVTTKISV HESKANQRNE LFQADCFQEH LNGDASCRYF SGGSGQISGI ETSNSSKVLG SHKSGRMYVE EVKASPVESV SSSPARSSCP TNDILQEAEK
0801: LRKLADCFKS SGFEYEYKEI NFKAALRFLL GASVLEMCST DNVEVGKMSH IEAYHTAAKL SESCAHQYET SQEMAAATLA YKCTEVACMR LVYGRSLGLS
0901: GEWNELQKMV QMTPQGESPS SSASDVDSFN HQGVIKKSAK TRRGLSHVAG NLLPVARSQL NFVPLLDFTG SMNLAMEASA KSQNAFKAVT DTSEERKHGD
1001: CISAIKKVVD FSFHDVEALI KMIEVAMDAL SSSRFGGPKC
0101: NYQTSGSLLA QAPGKVPINK GNARTPANDL PHNKPIRVRI KMGSEILSQS VAMVCKDLGL DGSPNSPPRI SQDDSSRMLP HTSLGKTSES PSRILQEMTA
0201: ISVPEDLLMS PLPDSLLLVK DKKKQYTLLD NQPMIKTGKK SSIQIQNKFS DVLCCEKTPI GRRRKEVDCF HATTWNETKK HKVLSTGQLA RDNSACGLGG
0301: ASLTTDGFTT KSNLQEGCRK DGESDPRVAN KIKFVGLHAV KEKKTCPTKL QQNRSKYRIG DKVLSKMPLK DAAYIGHNSM DTGFDFAVAP SSTSVDLDYW
0401: AQCESCEKWR LLPYDLNTEK LPDKWLCSMQ TWLPGMNHCG VSEEETTNAI KSFHASEGHG PDTGVKLLSD VRNADKIYQP LTSGSLPNPI EKKSNVEDLS
0501: QGVSSNILVD AAKPMRSNPH IFKNKNMKLP GETPTATQIS ADLSHDFFQD KIDQKAKRRA AGAGCQIKVK KKKEADKEES DGSKHIKTGD GNKLARVIKA
0601: EEIHWNQDPK WTPAERKRKR HDNDFCTLNV ERDPKKRLLV SKKKPDHKPQ LITASGSLCT KAQGNINSTV RKIRLMGYKQ GKDGKNSKLF ADGEENEPSM
0701: EKAVTTKISV HESKANQRNE LFQADCFQEH LNGDASCRYF SGGSGQISGI ETSNSSKVLG SHKSGRMYVE EVKASPVESV SSSPARSSCP TNDILQEAEK
0801: LRKLADCFKS SGFEYEYKEI NFKAALRFLL GASVLEMCST DNVEVGKMSH IEAYHTAAKL SESCAHQYET SQEMAAATLA YKCTEVACMR LVYGRSLGLS
0901: GEWNELQKMV QMTPQGESPS SSASDVDSFN HQGVIKKSAK TRRGLSHVAG NLLPVARSQL NFVPLLDFTG SMNLAMEASA KSQNAFKAVT DTSEERKHGD
1001: CISAIKKVVD FSFHDVEALI KMIEVAMDAL SSSRFGGPKC
Arabidopsis Description
At4g15730 [Source:UniProtKB/TrEMBL;Acc:Q8GY51]
SUBAcon: [golgi,nucleus]
SUBAcon: [golgi,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.