Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G425300.1 | Wheat | cytosol | 85.11 | 99.72 |
| TraesCS5B01G427400.1 | Wheat | cytosol | 95.92 | 99.5 |
| TraesCS5D01G433700.3 | Wheat | cytosol, plastid | 99.04 | 99.4 |
| KRH21073 | Soybean | cytosol | 31.69 | 92.31 |
| EER93338 | Sorghum | plastid | 90.28 | 90.17 |
| Zm00001d034361_P001 | Maize | cytosol, plastid | 89.2 | 89.3 |
| Zm00001d013116_P002 | Maize | plastid | 88.84 | 86.05 |
| GSMUA_Achr4P22850_001 | Banana | cytosol | 77.55 | 80.45 |
| KRH11182 | Soybean | cytosol, plastid | 75.87 | 80.2 |
| KRH58640 | Soybean | cytosol | 74.43 | 80.0 |
| Solyc02g021470.2.1 | Tomato | cytosol, nucleus, plastid | 74.55 | 79.11 |
| KRH42547 | Soybean | cytosol | 72.75 | 78.8 |
| VIT_10s0003g03710.t01 | Wine grape | cytosol | 75.75 | 78.68 |
| CDY33461 | Canola | cytosol | 71.19 | 77.92 |
| CDX77644 | Canola | cytosol | 71.67 | 77.84 |
| Bra025031.1-P | Field mustard | cytosol | 70.83 | 77.63 |
| Bra022023.1-P | Field mustard | plastid | 72.51 | 76.94 |
| CDY43957 | Canola | cytosol | 71.55 | 76.8 |
| CDX87735 | Canola | cytosol | 71.43 | 76.28 |
| CDY35152 | Canola | plastid | 71.91 | 76.21 |
| Bra017569.1-P | Field mustard | plastid | 71.79 | 76.08 |
| CDY03235 | Canola | plastid | 72.03 | 75.95 |
| AT5G46210.1 | Thale cress | cytosol | 71.55 | 75.25 |
| Solyc02g070460.2.1 | Tomato | plastid | 72.27 | 75.06 |
| GSMUA_Achr7P01270_001 | Banana | cytosol | 77.91 | 74.17 |
| KRH21072 | Soybean | plastid | 40.94 | 70.6 |
| HORVU6Hr1G075720.2 | Barley | cytosol | 35.65 | 39.81 |
| HORVU2Hr1G115070.1 | Barley | cytosol | 34.57 | 37.84 |
| HORVU1Hr1G020400.1 | Barley | cytosol | 29.05 | 32.48 |
| HORVU1Hr1G020390.1 | Barley | cytosol | 28.45 | 31.77 |
| HORVU3Hr1G006770.1 | Barley | cytosol | 25.45 | 28.69 |
| HORVU3Hr1G098530.4 | Barley | cytosol | 6.12 | 16.94 |
Protein Annotations
Description
No Description!
Coordinates
chrchr5H:-:616403001..616411375
Molecular Weight (calculated)
94254.0 Da
IEP (calculated)
8.481
GRAVY (calculated)
-0.360
Length
833 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHPHASAPK RPFSSSSPSP ASPAPPHMKK AKLPASSSST SSAGPTEKNG LHLDPAAAAA VRGGGRTNGE EDAEMLLADQ DELRAPNASA PGGGTANLFR
101: KKATLPQPPA TAATRKPLRI KIGQPKLPKN FEEDTWAILK DAITAIFLKQ KLSCDVEKLY QAAGDLCLHK LGANLYERVK KECEIHISAK ISALVGQSPD
201: LVVFLSLVQR TWQDFCDQML IIRGIALLLD VKYVKNVANL CSVWDMGLQL FRKHISLSPE IEHKTVTGLL RLIESERLGE AIDKTLLSHL LKMFTDLGMY
301: SETFEKPFLE CTSEFYATEG VKYLQQSDIP DYLKHAESRL QEEHDRCILY LEANTRKPLI ATTEKQLLQR HTSAIIEKGF TVLMEANRVT DLSRMYTLFQ
401: RVDAIEMLKQ ALSLYIRGTG QGIIMDEEKD KDLVPFLLEF KASLDKILEE SFAKNEAFSN TIKESFEHLI NLRQNRPAEL IAKFLDEKLR AGNKGTSEEE
501: LEGILDKVLV LFRFIQGKDV FEAFYKKDLA KRLLLGKXXA SIDAEKSMIT KLKTECGSQF TNKLEGMFKD IELSKEINDS FKQSSQARTK LPTGIEMSVH
601: VLTTGYWPTY PPMDVKLPHE LNVYQDIFKE FYLSKYSGRR LMWQNSLGHC VLKVEFPKGR KELAVSLFQS VVLMLFNDAQ KLSFVDIKES TGIEDKELRR
701: TLQSLACGKV RVLQKTPKGR DIDDKDEFVF NEDFSAPLYR IKVNAIQMKE TVEENTSTTE RVFQDRQYQV DAAIVRIMKT RKTLSHTLLI TELFQQLKFP
801: IKPADMKKRI ESLIDREYLE RDRSNPQIYN YLA
101: KKATLPQPPA TAATRKPLRI KIGQPKLPKN FEEDTWAILK DAITAIFLKQ KLSCDVEKLY QAAGDLCLHK LGANLYERVK KECEIHISAK ISALVGQSPD
201: LVVFLSLVQR TWQDFCDQML IIRGIALLLD VKYVKNVANL CSVWDMGLQL FRKHISLSPE IEHKTVTGLL RLIESERLGE AIDKTLLSHL LKMFTDLGMY
301: SETFEKPFLE CTSEFYATEG VKYLQQSDIP DYLKHAESRL QEEHDRCILY LEANTRKPLI ATTEKQLLQR HTSAIIEKGF TVLMEANRVT DLSRMYTLFQ
401: RVDAIEMLKQ ALSLYIRGTG QGIIMDEEKD KDLVPFLLEF KASLDKILEE SFAKNEAFSN TIKESFEHLI NLRQNRPAEL IAKFLDEKLR AGNKGTSEEE
501: LEGILDKVLV LFRFIQGKDV FEAFYKKDLA KRLLLGKXXA SIDAEKSMIT KLKTECGSQF TNKLEGMFKD IELSKEINDS FKQSSQARTK LPTGIEMSVH
601: VLTTGYWPTY PPMDVKLPHE LNVYQDIFKE FYLSKYSGRR LMWQNSLGHC VLKVEFPKGR KELAVSLFQS VVLMLFNDAQ KLSFVDIKES TGIEDKELRR
701: TLQSLACGKV RVLQKTPKGR DIDDKDEFVF NEDFSAPLYR IKVNAIQMKE TVEENTSTTE RVFQDRQYQV DAAIVRIMKT RKTLSHTLLI TELFQQLKFP
801: IKPADMKKRI ESLIDREYLE RDRSNPQIYN YLA
001: MSLPTKRSTF SAASASDDSS YSSPPMKKAK NDLHHSPQHP NTADKVVGFH MEEDPTPAAA NLSRKKATLP QPTKKFVIKL NKAKPTLPTN FEENTWEKLQ
101: SAIRAIFLKK KISFDLESLY QAVDNLCLHK LDGKLYDQIE KECEEHISAA LQSLVGQNTD LTVFLSRVEK CWQDFCDQML MIRSIALTLD RKYVIQNPNV
201: RSLWEMGLQL FRKHLSLAPE VEQRTVKGLL SMIEKERLAE AVNRTLLSHL LKMFTALGIY MESFEKPFLE GTSEFYAAEG MKYMQQSDVP EYLKHVEGRL
301: HEENERCILY IDAVTRKPLI TTVERQLLER HILVVLEKGF TTLMDGRRTE DLQRMQTLFS RVNALESLRQ ALSSYVRKTG QKIVMDEEKD KDMVQSLLDF
401: KASLDIIWEE SFYKNESFGN TIKDSFEHLI NLRQNRPAEL IAKFLDEKLR AGNKGTSEEE LESVLEKVLV LFRFIQGKDV FEAFYKKDLA KRLLLGKSAS
501: IDAEKSMISK LKTECGSQFT NKLEGMFKDI ELSKEINESF KQSSQARTKL PSGIEMSVHV LTTGYWPTYP PMDVKLPHEL NVYQDIFKEF YLSKYSGRRL
601: MWQNSLGHCV LKADFSKGKK ELAVSLFQAV VLMLFNDAMK LSFEDIKDST SIEDKELRRT LQSLACGKVR VLQKNPKGRD VEDGDEFEFN DEFAAPLYRI
701: KVNAIQMKET VEENTSTTER VFQDRQYQID AAIVRIMKTR KVLSHTLLIT ELFQQLKFPI KPADLKKRIE SLIDREYLER EKSNPQIYNY LA
101: SAIRAIFLKK KISFDLESLY QAVDNLCLHK LDGKLYDQIE KECEEHISAA LQSLVGQNTD LTVFLSRVEK CWQDFCDQML MIRSIALTLD RKYVIQNPNV
201: RSLWEMGLQL FRKHLSLAPE VEQRTVKGLL SMIEKERLAE AVNRTLLSHL LKMFTALGIY MESFEKPFLE GTSEFYAAEG MKYMQQSDVP EYLKHVEGRL
301: HEENERCILY IDAVTRKPLI TTVERQLLER HILVVLEKGF TTLMDGRRTE DLQRMQTLFS RVNALESLRQ ALSSYVRKTG QKIVMDEEKD KDMVQSLLDF
401: KASLDIIWEE SFYKNESFGN TIKDSFEHLI NLRQNRPAEL IAKFLDEKLR AGNKGTSEEE LESVLEKVLV LFRFIQGKDV FEAFYKKDLA KRLLLGKSAS
501: IDAEKSMISK LKTECGSQFT NKLEGMFKDI ELSKEINESF KQSSQARTKL PSGIEMSVHV LTTGYWPTYP PMDVKLPHEL NVYQDIFKEF YLSKYSGRRL
601: MWQNSLGHCV LKADFSKGKK ELAVSLFQAV VLMLFNDAMK LSFEDIKDST SIEDKELRRT LQSLACGKVR VLQKNPKGRD VEDGDEFEFN DEFAAPLYRI
701: KVNAIQMKET VEENTSTTER VFQDRQYQID AAIVRIMKTR KVLSHTLLIT ELFQQLKFPI KPADLKKRIE SLIDREYLER EKSNPQIYNY LA
Arabidopsis Description
CUL4Cullin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGH4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.