Factsheet for HORVU5Hr1G008820.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G094530.1
HORVU3Hr1G050820.11
HORVU7Hr1G056610.1
HORVU7Hr1G056620.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G65030.1	HORVU1Hr1G094530.1	AT4G05420.1	18223036
AT1G65030.1	HORVU3Hr1G050820.11	AT4G05420.1	18223036
AT1G65030.1	HORVU7Hr1G056610.1	AT4G05420.1	18223036
AT1G65030.1	HORVU7Hr1G056620.1	AT4G05420.1	18223036

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G041900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	86.78	94.08
TraesCS5B01G033700.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	85.92	92.86
TraesCS5A01G033600.1	Wheat	mitochondrion, plastid	85.34	91.95
Os12t0615900-01	Rice	nucleus	59.48	82.8
EES16386	Sorghum	plastid	75.29	79.39
Zm00001d022257_P002	Maize	plastid	73.28	74.13
HORVU0Hr1G027960.1	Barley	plastid	68.97	72.29
GSMUA_Achr4P31530_001	Banana	cytosol	53.16	52.71
KRH37745	Soybean	nucleus	47.13	51.41
VIT_08s0007g00490.t01	Wine grape	mitochondrion, plastid	49.14	50.59
PGSC0003DMT400057752	Potato	cytosol	46.84	48.37
Solyc02g078830.2.1	Tomato	nucleus	46.55	48.07
KRH12797	Soybean	nucleus	47.7	47.84
AT1G65030.1	Thale cress	cytosol, nucleus, plastid	45.69	46.09
CDY64887	Canola	cytosol	44.83	45.61
CDX96086	Canola	cytosol	44.83	45.35
Bra004232.1-P	Field mustard	cytosol	44.83	45.35
CDY12650	Canola	cytosol	44.54	45.06
CDY01817	Canola	cytosol	44.54	45.06
CDY01885	Canola	plastid	16.95	37.11
Bra033995.1-P	Field mustard	cytosol	35.06	31.61

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.2	UniProt:A0A287QAA5	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:HORVU5Hr1G008820	EnsemblPlants:HORVU5Hr1G008820.2	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
PFAM:PF00400	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR44675
SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000B4859CC	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS
InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:19883507..19885802

Molecular Weight (calculated)

36803.0 Da

IEP (calculated)

9.272

GRAVY (calculated)

-0.036

Length

348 amino acids

Sequence
(BLAST)

001: FSPFLPQPFR RRRRRRRVGS LAPSPMALVA GSYERFIWGF SLKAVSAGAS DEDPRPLAPL FSYPAHAGPI RCVAAAPRAG LAASGGADDS VRLYDLRAAA
101: DLGPLLDPCA AVSALAFHSV GPVPRNLLAA SDDGLLHLYD ADGFALLASL RVFPRGREAA DAIAVHPSGR VALAVGRAGG LSMVNLLRGR RCFTCRLERP
201: ASAVAYAEDA AGGDRFVMAA EEKVTVHDSE DARIIHDMRC DKRVLALAPS KNGVLYTGGE DRGITAWDLS SGKVSSRIEG AHSTRVKGIV VFDDRNDGSE
301: SSTLVASASS DGIIRIWDVR MIGSEKPTPL AEASTKARLT CLAGTSLK

Best Arabidopsis Sequence Match ( AT1G65030.1 )
(BLAST)

001: MSIIAGSYER FIWGFKLKPT KHDAESQTLT LSPLFSYPSH ISPITTVACS GPAAASGGSD DTIHLYDLPS ASSLGSLLDH NHAASITALS FYTPSSLSFP
101: RNLISAAADG SVAIFDTDPF VLLKSFRPHK KAVNDLAIHP SGKLALAVYR DEFFAMLNLV RGKRSFCCRL GHEASLVKFD PSGERFYMVV SNKVGVHQSE
201: DAKLLLELEN PSRKRILCAT PGESGTLFTG GEDRAITAWD TNSGKLAYSI EDAHPARIKG IVVLTRNDSD GSLEDPYLIG SASSDGIIRV WDVRMAAKEN
301: TKPLAETNTK SRLTCLAGSA LKSMRRPQIG KQEPQKVDEE HEDSE

Arabidopsis Description

At1g65030 [Source:UniProtKB/TrEMBL;Acc:Q5XEV4]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.