Factsheet for AT1G65030.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64887	Canola	cytosol	89.57	90.35
CDX96086	Canola	cytosol	89.86	90.12
CDY01817	Canola	cytosol	89.86	90.12
Bra004232.1-P	Field mustard	cytosol	89.57	89.83
CDY12650	Canola	cytosol	88.41	88.66
CDY01885	Canola	plastid	31.3	67.92
VIT_08s0007g00490.t01	Wine grape	mitochondrion, plastid	65.51	66.86
Bra033995.1-P	Field mustard	cytosol	71.01	63.47
KRH37745	Soybean	nucleus	58.55	63.32
PGSC0003DMT400057752	Potato	cytosol	60.58	62.02
Solyc02g078830.2.1	Tomato	nucleus	60.58	62.02
KRH12797	Soybean	nucleus	58.84	58.5
GSMUA_Achr4P31530_001	Banana	cytosol	54.2	53.28
TraesCS5D01G041900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	47.54	51.09
TraesCS5B01G033700.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	47.54	50.93
EES16386	Sorghum	plastid	48.7	50.91
Os12t0615900-01	Rice	nucleus	36.81	50.8
TraesCS5A01G033600.1	Wheat	mitochondrion, plastid	47.54	50.77
Zm00001d022257_P002	Maize	plastid	48.7	48.84
HORVU5Hr1G008820.2	Barley	mitochondrion	46.09	45.69
HORVU0Hr1G027960.1	Barley	plastid	32.46	33.73

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.2	EntrezGene:842811	UniProt:A0A178W155	ProteinID:AEE34317.1	ArrayExpress:AT1G65030
EnsemblPlantsGene:AT1G65030	RefSeq:AT1G65030	TAIR:AT1G65030	RefSeq:AT1G65030-TAIR-G	EnsemblPlants:AT1G65030.1	TAIR:AT1G65030.1
Unigene:At.74019	EMBL:BT015862	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	GO:GO:0080008	InterPro:IPR001680
InterPro:IPR015943	InterPro:IPR017986	RefSeq:NP_176683.1	ProteinID:OAP11814.1	PFAM:PF00400	PO:PO:0000005
PO:PO:0000293	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR44675	UniProt:Q5XEV4
SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000016321F	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS
InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:

Description

At1g65030 [Source:UniProtKB/TrEMBL;Acc:Q5XEV4]

Coordinates

chr1:+:24156672..24158675

Molecular Weight (calculated)

37457.4 Da

IEP (calculated)

6.906

GRAVY (calculated)

-0.240

Length

345 amino acids

Sequence
(BLAST)

001: MSIIAGSYER FIWGFKLKPT KHDAESQTLT LSPLFSYPSH ISPITTVACS GPAAASGGSD DTIHLYDLPS ASSLGSLLDH NHAASITALS FYTPSSLSFP
101: RNLISAAADG SVAIFDTDPF VLLKSFRPHK KAVNDLAIHP SGKLALAVYR DEFFAMLNLV RGKRSFCCRL GHEASLVKFD PSGERFYMVV SNKVGVHQSE
201: DAKLLLELEN PSRKRILCAT PGESGTLFTG GEDRAITAWD TNSGKLAYSI EDAHPARIKG IVVLTRNDSD GSLEDPYLIG SASSDGIIRV WDVRMAAKEN
301: TKPLAETNTK SRLTCLAGSA LKSMRRPQIG KQEPQKVDEE HEDSE

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.