Factsheet for GSMUA_Achr4P31530_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plastid 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr8P07200_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G65030.1	GSMUA_Achr8P07200_001	AT4G05420.1	18223036

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0007g00490.t01	Wine grape	mitochondrion, plastid	58.4	60.65
TraesCS5D01G041900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	54.7	59.81
TraesCS5B01G033700.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	54.42	59.32
Os12t0615900-01	Rice	nucleus	42.17	59.2
TraesCS5A01G033600.1	Wheat	mitochondrion, plastid	54.42	59.13
EES16386	Sorghum	plastid	53.85	57.27
Solyc02g078830.2.1	Tomato	nucleus	54.13	56.38
PGSC0003DMT400057752	Potato	cytosol	53.85	56.08
KRH37745	Soybean	nucleus	50.71	55.8
Zm00001d022257_P002	Maize	plastid	54.13	55.23
Bra004232.1-P	Field mustard	cytosol	53.28	54.36
CDX96086	Canola	cytosol	53.28	54.36
AT1G65030.1	Thale cress	cytosol, nucleus, plastid	53.28	54.2
CDY01817	Canola	cytosol	52.99	54.07
CDY64887	Canola	cytosol	52.42	53.8
CDY12650	Canola	cytosol	52.42	53.49
HORVU5Hr1G008820.2	Barley	mitochondrion	52.71	53.16
KRH12797	Soybean	nucleus	50.14	50.72
CDY01885	Canola	plastid	20.51	45.28
HORVU0Hr1G027960.1	Barley	plastid	37.04	39.16
Bra033995.1-P	Field mustard	cytosol	42.45	38.6

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.2	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	GO:GO:0080008
EnsemblPlantsGene:GSMUA_Achr4G31530_001	EnsemblPlants:GSMUA_Achr4P31530_001	EnsemblPlants:GSMUA_Achr4T31530_001	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
UniProt:M0STR5	PFAM:PF00400	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294
PANTHER:PTHR44675	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0002961EED	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:

Description

Putative p21-activated protein kinase-interacting protein 1-like [Source:GMGC_GENE;Acc:GSMUA_Achr4G31530_001]

Coordinates

chr4:-:28710886..28713811

Molecular Weight (calculated)

37747.0 Da

IEP (calculated)

8.019

GRAVY (calculated)

0.018

Length

351 amino acids

Sequence
(BLAST)

001: MATLVAGSYE KFIWGFAFKP ETLTLKPLFS YPSHIGPIKA VATAGTVAAS GGSDDAIKLY DLAAAAEVGT LLDHSGAVTA LAFYAPASSP GGLPRNLLSA
101: SDDGAVCIYD ADPFVHLKTV PTHRKGIADL AVHPTGRAAL TVGRDACLAL INLVRGRRSF SCRLDREASI VRYGCGDGAR FFMVADERIT VHDSEDARLI
201: QEMDGQKRVL CVAPSENGVL FTGGEDRSIT AWDTTSGKVA YSIEDAHSTR VKGLVTFKNG NDAESSEASN FIVSASSDGV VRVWDARMTA KEKPNPLAET
301: NTKSRLTCLA GSFRKLISFY KHLCLQKIFF LCYFAKFDTR IHSIHVISSV P

Best Arabidopsis Sequence Match ( AT1G65030.1 )
(BLAST)

001: MSIIAGSYER FIWGFKLKPT KHDAESQTLT LSPLFSYPSH ISPITTVACS GPAAASGGSD DTIHLYDLPS ASSLGSLLDH NHAASITALS FYTPSSLSFP
101: RNLISAAADG SVAIFDTDPF VLLKSFRPHK KAVNDLAIHP SGKLALAVYR DEFFAMLNLV RGKRSFCCRL GHEASLVKFD PSGERFYMVV SNKVGVHQSE
201: DAKLLLELEN PSRKRILCAT PGESGTLFTG GEDRAITAWD TNSGKLAYSI EDAHPARIKG IVVLTRNDSD GSLEDPYLIG SASSDGIIRV WDVRMAAKEN
301: TKPLAETNTK SRLTCLAGSA LKSMRRPQIG KQEPQKVDEE HEDSE

Arabidopsis Description

At1g65030 [Source:UniProtKB/TrEMBL;Acc:Q5XEV4]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.