Factsheet for GSMUA_Achr11P05540_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
plastid 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr4P22850_001
GSMUA_Achr7P01270_001
GSMUA_Achr7P14310_001
GSMUA_Achr7P14320_001
GSMUA_Achr8P07200_001
GSMUA_Achr9P23340_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G15900.1	GSMUA_Achr9P23340_001	AT1G09770.1	17575050
AT4G15900.1	GSMUA_Achr10P...	AT3G29160.1	10220464
AT4G15900.1	GSMUA_AchrUn_...	AT3G29160.1	10220464
AT4G15900.1	GSMUA_Achr8P07200_001	AT4G05420.1	18223036
AT4G15900.1	GSMUA_Achr4P22850_001	AT5G46210.1	18223036
AT4G15900.1	GSMUA_Achr7P01270_001	AT5G46210.1	18223036
AT4G15900.1	GSMUA_Achr7P14310_001	AT5G58720.1	10220464
AT4G15900.1	GSMUA_Achr7P14320_001	AT5G58720.1	10220464

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P10210_001	Banana	cytosol	19.14	97.89
GSMUA_Achr8P10200_001	Banana	cytosol	17.49	95.51
Os03t0339100-01	Rice	nucleus	78.4	80.72
TraesCS3D01G181100.1	Wheat	cytosol	78.81	79.96
TraesCS3A01G175600.2	Wheat	plastid	78.6	79.92
TraesCS3B01G205300.1	Wheat	cytosol	78.6	79.75
KXG25821	Sorghum	cytosol	78.6	79.75
Zm00001d033309_P003	Maize	cytosol	78.81	79.3
CDY27174	Canola	cytosol	24.49	77.78
VIT_05s0077g02310.t01	Wine grape	cytosol	75.93	76.24
KRH12069	Soybean	nucleus	73.87	75.42
PGSC0003DMT400023040	Potato	mitochondrion	46.91	74.27
KRH37088	Soybean	nucleus	72.84	74.21
Bra012753.1-P	Field mustard	cytosol	72.22	72.97
AT4G15900.1	Thale cress	cytosol	71.6	71.6
Bra007287.1-P	Field mustard	cytosol	58.85	71.5
HORVU3Hr1G035450.7	Barley	mitochondrion	73.87	70.12
GSMUA_Achr8P10190_001	Banana	cytosol, plastid	39.51	69.57
AT3G16650.1	Thale cress	cytosol	66.05	67.01
CDY44171	Canola	cytosol	21.19	66.45
Solyc09g010620.1.1	Tomato	cytosol	22.02	65.64
Bra021188.1-P	Field mustard	cytosol	66.67	65.19
GSMUA_Achr11P...	Banana	cytosol	16.05	22.61
GSMUA_Achr2P08580_001	Banana	cytosol	12.55	21.48
GSMUA_Achr6P13100_001	Banana	cytosol	13.37	21.38
GSMUA_Achr4P10720_001	Banana	cytosol, plastid	14.2	20.47
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	3.91	20.21
GSMUA_Achr7P01850_001	Banana	plastid	9.67	20.09
GSMUA_Achr8P28660_001	Banana	cytosol	12.96	18.69
GSMUA_Achr3P29050_001	Banana	nucleus	17.28	17.57
GSMUA_Achr3P04370_001	Banana	cytosol	10.91	16.46
GSMUA_Achr3P27210_001	Banana	golgi	14.61	15.01
GSMUA_Achr2P06000_001	Banana	cytosol	14.2	14.56
GSMUA_Achr4P29380_001	Banana	nucleus	15.02	10.27
GSMUA_Achr4P05370_001	Banana	golgi, mitochondrion	16.05	9.84
GSMUA_Achr1P08830_001	Banana	cytosol	16.26	8.16
GSMUA_Achr9P23740_001	Banana	golgi	15.84	7.35
GSMUA_Achr3P27200_001	Banana	golgi, plasma membrane, vacuole	3.29	4.31

Protein Annotations

MapMan:16.4.5.1.3	Gene3D:2.130.10.10	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSMUA_Achr11G05540_001	EnsemblPlants:GSMUA_Achr11P05540_001	EnsemblPlants:GSMUA_Achr11T05540_001	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
UniProt:M0RPN4	PFAM:PF00400	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294
PANTHER:PTHR19923	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0002957B10	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:

Description

Protein pleiotropic regulatory locus 1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G05540_001]

Coordinates

chr11:-:4118711..4129071

Molecular Weight (calculated)

53723.1 Da

IEP (calculated)

9.407

GRAVY (calculated)

-0.396

Length

486 amino acids

Sequence
(BLAST)

001: MAAPHPAAAM ELPVEPQSLK KLSLKSLKRA LDLFSPIHGH CSPPDPQSKR IRISYKVQAE YGSVTNLAGQ QAGEQNVIGE QGKGDQTSTS MALALPGSQE
101: AKASQNDGNQ NAIIPAPTML PKGPEIGPAS RNTGAVVSVT DRYQSTSALM ERIPSRWPRP IWHPPWRNYR VISGHLGWVR SIAFDPSNTW FCTGSADRTI
201: KIWDVASGRL KLTLTGHIEQ IRGLAVSQRH TYLFSAGDDK QVKCWDLEQN KVIRSYHGHL SGVYCLSLHP TIDVLLTGGR DSVCRVWDIR TKAMVMALSG
301: HENTVCSVFA RPTDPQVVTG SHDSTIKFWD LVAGKTMATL THHKKSVRAM ALHPKERAFA SASADNIKKF NLPKGEFLHN MLLQQKTIIN SMAVNEDGVL
401: ATAGDNGSLW FWDWKSGYNF QQAQTIVQPG SLDSEACIYA LSYDISGSRL VTCEADKTIK MWKEDPSATP ETHPLNFKPP KEFRRY

Best Arabidopsis Sequence Match ( AT4G15900.1 )
(BLAST)

001: MPAPTTEIEP IEAQSLKKLS LKSLKRSLEL FSPVHGQFPP PDPEAKQIRL SHKMKVAFGG VEPVVSQPPR QPDRINEQPG PSNALSLAAP EGSKSTQKGA
101: TESAIVVGPT LLRPILPKGL NYTGSSGKST TIIPANVSSY QRNLSTAALM ERIPSRWPRP EWHAPWKNYR VIQGHLGWVR SVAFDPSNEW FCTGSADRTI
201: KIWDVATGVL KLTLTGHIEQ VRGLAVSNRH TYMFSAGDDK QVKCWDLEQN KVIRSYHGHL SGVYCLALHP TLDVLLTGGR DSVCRVWDIR TKMQIFALSG
301: HDNTVCSVFT RPTDPQVVTG SHDTTIKFWD LRYGKTMSTL THHKKSVRAM TLHPKENAFA SASADNTKKF SLPKGEFCHN MLSQQKTIIN AMAVNEDGVM
401: VTGGDNGSIW FWDWKSGHSF QQSETIVQPG SLESEAGIYA ACYDNTGSRL VTCEADKTIK MWKEDENATP ETHPINFKPP KEIRRF

Arabidopsis Description

PRL1Protein pleiotropic regulatory locus 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42384]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.