Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72090 | Canola | mitochondrion | 73.0 | 87.43 |
| GSMUA_Achr8P10210_001 | Banana | cytosol | 19.25 | 81.05 |
| GSMUA_Achr8P10200_001 | Banana | cytosol | 17.25 | 77.53 |
| Bra021188.1-P | Field mustard | cytosol | 88.5 | 71.23 |
| Bra012753.1-P | Field mustard | cytosol | 81.25 | 67.57 |
| AT3G16650.1 | Thale cress | cytosol | 78.5 | 65.55 |
| PGSC0003DMT400023040 | Potato | mitochondrion | 49.0 | 63.84 |
| Solyc09g010620.1.1 | Tomato | cytosol | 26.0 | 63.8 |
| KRH37088 | Soybean | nucleus | 75.75 | 63.52 |
| KRH12069 | Soybean | nucleus | 75.5 | 63.45 |
| VIT_05s0077g02310.t01 | Wine grape | cytosol | 75.25 | 62.19 |
| Os03t0339100-01 | Rice | nucleus | 70.25 | 59.53 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, peroxisome, plastid | 71.5 | 58.85 |
| KXG25821 | Sorghum | cytosol | 70.25 | 58.66 |
| TraesCS3B01G205300.1 | Wheat | cytosol | 70.0 | 58.46 |
| TraesCS3D01G181100.1 | Wheat | cytosol | 70.0 | 58.46 |
| TraesCS3A01G175600.2 | Wheat | plastid | 69.5 | 58.16 |
| Zm00001d033309_P003 | Maize | cytosol | 69.5 | 57.56 |
| HORVU3Hr1G035450.7 | Barley | mitochondrion | 66.0 | 51.56 |
| GSMUA_Achr8P10190_001 | Banana | cytosol, plastid | 28.75 | 41.67 |
| Bra024323.1-P | Field mustard | cytosol | 15.25 | 20.54 |
| Bra018529.1-P | Field mustard | cytosol | 15.25 | 18.71 |
| Bra019610.1-P | Field mustard | plastid | 14.25 | 17.98 |
| Bra003111.1-P | Field mustard | nucleus | 9.5 | 16.38 |
| Bra003387.1-P | Field mustard | cytosol | 13.75 | 16.37 |
| Bra016111.1-P | Field mustard | cytosol | 14.0 | 14.04 |
| Bra009201.1-P | Field mustard | nucleus | 16.5 | 13.75 |
| Bra022611.1-P | Field mustard | cytosol | 16.25 | 13.66 |
| Bra004783.1-P | Field mustard | cytosol, golgi | 14.0 | 13.49 |
| Bra003910.1-P | Field mustard | cytosol | 11.25 | 11.9 |
| Bra023416.1-P | Field mustard | nucleus | 16.25 | 10.05 |
| Bra006202.1-P | Field mustard | nucleus | 16.25 | 9.82 |
| Bra037932.1-P | Field mustard | mitochondrion | 12.75 | 8.87 |
| Bra005990.1-P | Field mustard | cytosol | 15.0 | 7.08 |
| Bra009683.1-P | Field mustard | cytosol | 14.75 | 6.51 |
| Bra031445.1-P | Field mustard | cytosol | 17.5 | 6.24 |
Protein Annotations
| MapMan:16.4.5.1.3 | Gene3D:2.130.10.10 | EnsemblPlantsGene:Bra007287 | EnsemblPlants:Bra007287.1 | EnsemblPlants:Bra007287.1-P | InterPro:G-protein_beta_WD-40_rep |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 |
| UniProt:M4CSU5 | PFAM:PF00400 | PRINTS:PR00320 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 |
| PANTHER:PTHR19923 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI0002542C1B | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat |
| InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | : | : | : |
Description
AT4G15900 (E=4e-151) PRL1 | PRL1 (PLEIOTROPIC REGULATORY LOCUS 1); basal transcription repressor/ nucleotide binding / protein binding
Coordinates
chrA09:-:28373026..28374284
Molecular Weight (calculated)
44615.6 Da
IEP (calculated)
8.375
GRAVY (calculated)
-0.548
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTEIEPKQS LQKLSLKSVK RALDVFSPAH DDQLAPPDPE SKKIRLSHKF QVAFGGVEPV SKQSIRRAEY NNNEQIASSN ALALPGPEGA EWHAPWKNYT
101: RGTWADRTIK VWDVASGVLK LTLTGHIGQV RGLAVSNKDT SYMFSAGDDK QVKCWDLEQN KVIRSYHGHL SGVYCLALHP TLDVLLTGGR DSVCRVWDIR
201: TKTQSFALSG HDKDVCSVFT PPTHPPQVVT GSHDSTIKFW DLRYGRTMTT LTNHKKAVRA MALHPKENEN AFVSASADNI NKFSLNPKGE FRHNMLSQQR
301: ATINAVAVNE DGVMVTGGDN GSLWFWDWKS GHSFQQAEAI VQPGSLESEA GIYAACYDQT GSRLVTCEAD KTIKMWKEDD NATPETHPLN FRPPKEIRRF
101: RGTWADRTIK VWDVASGVLK LTLTGHIGQV RGLAVSNKDT SYMFSAGDDK QVKCWDLEQN KVIRSYHGHL SGVYCLALHP TLDVLLTGGR DSVCRVWDIR
201: TKTQSFALSG HDKDVCSVFT PPTHPPQVVT GSHDSTIKFW DLRYGRTMTT LTNHKKAVRA MALHPKENEN AFVSASADNI NKFSLNPKGE FRHNMLSQQR
301: ATINAVAVNE DGVMVTGGDN GSLWFWDWKS GHSFQQAEAI VQPGSLESEA GIYAACYDQT GSRLVTCEAD KTIKMWKEDD NATPETHPLN FRPPKEIRRF
001: MTMIALNREV ETQSLKKLSL KSVRRAREIF SPVHGQFPQP DPESKRIRLC HKIQVAFGGV EPASKPTRIA DHNSEKTAPL KALALPGPKG SKELRKSATE
101: KALVVGPTLP PRDLNNTGNP GKSTAILPAP GSFSERNLST AALMERMPSR WPRPEWHAPW KNYRVLQGHL GWVRSVAFDP SNEWFCTGSA DRTIKIWDVA
201: TGVLKLTLTG HIGQVRGLAV SNRHTYMFSA GDDKQVKCWD LEQNKVIRSY HGHLHGVYCL ALHPTLDVVL TGGRDSVCRV WDIRTKMQIF VLPHDSDVFS
301: VLARPTDPQV ITGSHDSTIK FWDLRYGKSM ATITNHKKTV RAMALHPKEN DFVSASADNI KKFSLPKGEF CHNMLSLQRD IINAVAVNED GVMVTGGDKG
401: GLWFWDWKSG HNFQRAETIV QPGSLESEAG IYAACYDQTG SRLVTCEGDK TIKMWKEDED ATPETHPLNF KPPKEIRRF
101: KALVVGPTLP PRDLNNTGNP GKSTAILPAP GSFSERNLST AALMERMPSR WPRPEWHAPW KNYRVLQGHL GWVRSVAFDP SNEWFCTGSA DRTIKIWDVA
201: TGVLKLTLTG HIGQVRGLAV SNRHTYMFSA GDDKQVKCWD LEQNKVIRSY HGHLHGVYCL ALHPTLDVVL TGGRDSVCRV WDIRTKMQIF VLPHDSDVFS
301: VLARPTDPQV ITGSHDSTIK FWDLRYGKSM ATITNHKKTV RAMALHPKEN DFVSASADNI KKFSLPKGEF CHNMLSLQRD IINAVAVNED GVMVTGGDKG
401: GLWFWDWKSG HNFQRAETIV QPGSLESEAG IYAACYDQTG SRLVTCEGDK TIKMWKEDED ATPETHPLNF KPPKEIRRF
Arabidopsis Description
PRL2Protein pleiotropic regulator PRL2 [Source:UniProtKB/Swiss-Prot;Acc:Q39190]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.