Factsheet for GSMUA_AchrUn_randomP09220_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2
plasma membrane 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr1P05590_001
GSMUA_Achr1P23090_001
GSMUA_Achr2P04520_001
GSMUA_Achr3P04440_001
GSMUA_Achr3P05620_001
GSMUA_Achr3P05880_001
GSMUA_Achr3P08980_001
GSMUA_Achr3P19540_001
GSMUA_Achr4P01820_001
GSMUA_Achr4P06840_001
GSMUA_Achr4P13800_001
GSMUA_Achr5P05900_001
GSMUA_Achr5P08000_001
GSMUA_Achr5P24390_001
GSMUA_Achr6P02010_001
GSMUA_Achr6P04060_001
GSMUA_Achr6P06410_001
GSMUA_Achr6P20920_001
GSMUA_Achr7P12530_001
GSMUA_Achr7P17710_001
GSMUA_Achr8P10190_001
GSMUA_Achr8P10200_001
GSMUA_Achr8P10210_001
GSMUA_Achr8P14150_001
GSMUA_Achr8P18580_001
GSMUA_Achr8P21920_001
GSMUA_Achr8P23650_001
GSMUA_Achr9P13000_001
GSMUA_Achr9P13870_001
GSMUA_Achr9P14340_001
GSMUA_Achr9P15630_001
GSMUA_Achr9P19330_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G29160.1	GSMUA_Achr10P...	AT1G07310.1	21798944
AT3G29160.1	GSMUA_AchrUn_...	AT1G09020.1	17028154
AT3G29160.1	GSMUA_AchrUn_...	AT1G09020.1	17028154
AT3G29160.1	GSMUA_AchrUn_...	AT1G09020.1	21558384
AT3G29160.1	GSMUA_AchrUn_...	AT1G09020.1	21558384
AT3G29160.1	GSMUA_Achr10P...	AT1G25470.1	21798944
AT3G29160.1	GSMUA_Achr1P23090_001	AT1G25470.1	21798944
AT3G29160.1	GSMUA_Achr4P06840_001	AT1G25470.1	21798944
AT3G29160.1	GSMUA_Achr4P13800_001	AT1G25470.1	21798944
AT3G29160.1	GSMUA_Achr9P19330_001	AT1G25470.1	21798944
AT3G29160.1	GSMUA_Achr10P...	AT1G51600.1	21798944
AT3G29160.1	GSMUA_Achr2P04520_001	AT1G51600.1	21798944
AT3G29160.1	GSMUA_Achr3P05620_001	AT1G51600.1	21798944
AT3G29160.1	GSMUA_Achr9P13870_001	AT1G51600.1	21798944
AT3G29160.1	GSMUA_Achr10P...	AT1G78020.1	21798944
AT3G29160.1	GSMUA_Achr3P04440_001	AT1G78020.1	21798944
AT3G29160.1	GSMUA_Achr4P01820_001	AT1G78020.1	21798944
AT3G29160.1	GSMUA_Achr5P24390_001	AT1G78020.1	21798944
AT3G29160.1	GSMUA_Achr6P02010_001	AT1G78020.1	21798944
AT3G29160.1	GSMUA_Achr6P04060_001	AT1G78020.1	21798944
AT3G29160.1	GSMUA_Achr7P17710_001	AT1G78020.1	21798944
AT3G29160.1	GSMUA_Achr8P18580_001	AT1G78020.1	21798944
AT3G29160.1	GSMUA_Achr9P13000_001	AT1G78020.1	21798944
AT3G29160.1	GSMUA_Achr3P05880_001	AT3G14180.1	21798944
AT3G29160.1	GSMUA_Achr8P23650_001	AT3G14180.1	21798944
AT3G29160.1	GSMUA_Achr9P14340_001	AT3G14180.1	21798944
AT3G29160.1	GSMUA_Achr5P05900_001	AT3G17860.1	21798944
AT3G29160.1	GSMUA_Achr7P12530_001	AT3G17860.1	21798944
AT3G29160.1	GSMUA_Achr9P15630_001	AT3G17860.1	21798944
AT3G29160.1	GSMUA_Achr1P05590_001	AT3G45240.1	19339507
AT3G29160.1	GSMUA_Achr3P19540_001	AT3G48530.1	10417704
AT3G29160.1	GSMUA_AchrUn_...	AT3G48530.1	10417704
AT3G29160.1	GSMUA_Achr6P06410_001	AT3G48550.1	21798944
AT3G29160.1	GSMUA_Achr6P20920_001	AT3G48550.1	21798944
AT3G29160.1	GSMUA_Achr8P14150_001	AT3G52180.1	12148529
AT3G29160.1	GSMUA_Achr3P08980_001	AT4G15730.1	21798944
AT3G29160.1	GSMUA_Achr5P08000_001	AT4G15730.1	21798944
AT3G29160.1	GSMUA_Achr8P21920_001	AT4G15730.1	21798944
AT3G29160.1	GSMUA_Achr11P...	AT4G15900.1	10220464
AT3G29160.1	GSMUA_Achr8P10190_001	AT4G15900.1	10220464
AT3G29160.1	GSMUA_Achr8P10200_001	AT4G15900.1	10220464
AT3G29160.1	GSMUA_Achr8P10210_001	AT4G15900.1	10220464
AT3G29160.1	GSMUA_Achr1P05590_001	AT5G60550.1	19339507

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01228	Soybean	cytosol, nucleus	81.44	72.57
KRH18445	Soybean	cytosol, endoplasmic reticulum	80.79	71.84
KRH44934	Soybean	cytosol, endoplasmic reticulum, nucleus	79.91	71.76
VIT_14s0108g01230.t01	Wine grape	cytosol	80.35	71.6
GSMUA_Achr1P07130_001	Banana	cytosol	36.24	71.55
EES01406	Sorghum	cytosol	77.51	71.14
TraesCS1B01G364800.1	Wheat	cytosol	77.29	70.8
TraesCS1D01G353300.1	Wheat	cytosol	77.29	70.8
TraesCS1A01G350500.1	Wheat	cytosol	77.29	70.38
Os05t0530500-02	Rice	cytosol, plasma membrane	77.07	69.9
Solyc02g067030.2.1	Tomato	cytosol, nucleus	78.38	69.84
EES19859	Sorghum	cytosol	76.86	69.84
CDY34697	Canola	cytosol	77.73	69.67
CDY55800	Canola	cytosol	77.51	69.47
CDY37545	Canola	cytosol	76.64	69.37
CDY43267	Canola	cytosol	76.64	69.37
Zm00001d005108_P003	Maize	cytosol	75.98	69.18
TraesCS3D01G282800.1	Wheat	cytosol	75.98	69.18
TraesCS3A01G282800.1	Wheat	cytosol	75.98	69.18
Bra039146.1-P	Field mustard	cytosol	76.42	69.17
TraesCS3B01G316500.1	Wheat	cytosol	75.76	68.99
CDX85250	Canola	cytosol	77.07	68.95
AT3G29160.1	Thale cress	cytosol	77.07	68.95
Bra025379.1-P	Field mustard	cytosol	77.07	68.95
CDX86386	Canola	cytosol	77.07	68.81
HORVU1Hr1G081310.4	Barley	cytosol	77.07	67.88
CDY44405	Canola	cytosol	75.76	67.64
AT3G01090.2	Thale cress	cytosol	78.6	67.29
CDY04058	Canola	cytosol	74.24	66.93
CDX74283	Canola	cytosol	73.14	66.87
Bra033088.1-P	Field mustard	cytosol	71.62	66.8
GSMUA_Achr10P...	Banana	cytosol	87.55	64.68
HORVU3Hr1G069190.1	Barley	cytosol, plastid	75.33	60.42
PGSC0003DMT400063153	Potato	cytosol	65.94	59.92
Bra021482.1-P	Field mustard	cytosol	68.56	49.22
Zm00001d010811_P002	Maize	cytosol	66.81	41.3
Zm00001d038745_P002	Maize	cytosol	65.72	35.88
GSMUA_Achr3P13480_001	Banana	cytosol	29.26	32.21
GSMUA_Achr5P10310_001	Banana	cytosol	29.04	30.65
GSMUA_Achr4P31540_001	Banana	cytosol	29.26	30.32
GSMUA_Achr11P...	Banana	cytosol	29.04	30.3
GSMUA_Achr8P10920_001	Banana	cytosol	28.38	30.02
GSMUA_Achr3P09340_001	Banana	cytosol, mitochondrion	29.26	29.98
GSMUA_Achr11P...	Banana	cytosol	27.73	29.6
GSMUA_Achr4P23000_001	Banana	cytosol	29.04	29.56
GSMUA_Achr7P21500_001	Banana	cytosol	28.6	29.44
GSMUA_Achr1P25010_001	Banana	cytosol	28.6	28.73
GSMUA_Achr11P...	Banana	cytosol	27.95	28.38
GSMUA_AchrUn_...	Banana	cytosol	29.04	27.94
GSMUA_Achr1P10280_001	Banana	cytosol	27.95	27.83
CDX91963	Canola	plasma membrane	73.58	27.18
GSMUA_Achr10P...	Banana	cytosol	26.2	25.21
GSMUA_Achr4P13410_001	Banana	cytosol, mitochondrion	26.64	18.97

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.5.1.1	MapMan:27.3.1.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_AchrUn_randomG09220_001	EnsemblPlants:GSMUA_AchrUn_randomP09220_001	EnsemblPlants:GSMUA_AchrUn_randomT09220_001	InterPro:IPR000719	InterPro:IPR001772	InterPro:IPR015940
InterPro:KA1/Ssp2_C	InterPro:KA1_dom	InterPro:Kinase-like_dom_sf	UniProt:M0U7N2	PFAM:PF00069	PFAM:PF00627
PFAM:PF02149	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50030	PFscan:PS50032
PANTHER:PTHR24343	PANTHER:PTHR24343:SF156	InterPro:Prot_kinase_dom	SMART:SM00165	SMART:SM00220	SUPFAM:SSF103243
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	InterPro:UBA	UniParc:UPI0002951433	:	:

Description

SNF1-related protein kinase catalytic subunit alpha KIN10 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG09220_001]

Coordinates

chrchrUn_random:-:42853595..42857158

Molecular Weight (calculated)

52600.0 Da

IEP (calculated)

6.827

GRAVY (calculated)

-0.146

Length

458 amino acids

Sequence
(BLAST)

001: MTFVCIAVRR EIKILRLFMH PHIIHLYEVI ETQSDIYVVM EYVKSGELFD YIVEKGRLQE DEARRFFQQI ISGVEYCHRN MVVHRDLKPE NLLLDSKCDV
101: KIADFGLSNV MRDGHFLKTS CGSPNYAAPE VISGKLYAGP EVDVWSCGVI LYALLCGTLP FDDENIPNLF KKIKGGIYTL PSHLSALARD LIPRMLIVDP
201: MKRITIREIR EHPWFQTRLP RYLAVPPPDT IMQAKKIEED ILQEVIKMGF DKNQLVESLH NRIQNEATVS YYLLLDNRFR AMSGYLGGDF QETMDYGFSR
301: MGASEAPAIA HHLPGYMDPL GIGLRPSVPV EKKWALGLQS RAHPREIMTE VLKALRELNV CWKKIGHYNM KCRYFFGISD HAESMFNDSL HANHSVSDES
401: AIVESDNVSG KEFSTIKFEI QLYKTREEKY LLDLQRVSGP QLLFLDLCAS FLAQLRVL

Best Arabidopsis Sequence Match ( AT3G01090.3 )
(BLAST)

001: MDGSGTGSRS GVESILPNYK LGRTLGIGSF GRVKIAEHAL TGHKVAIKIL NRRKIKNMEM EEKVRREIKI LRLFMHPHII RLYEVIETPT DIYLVMEYVN
101: SGELFDYIVE KGRLQEDEAR NFFQQIISGV EYCHRNMVVH RDLKPENLLL DSKCNVKIAD FGLSNIMRDG HFLKTSCGSP NYAAPEVISG KLYAGPEVDV
201: WSCGVILYAL LCGTLPFDDE NIPNLFKKIK GGIYTLPSHL SPGARDLIPR MLVVDPMKRV TIPEIRQHPW FQAHLPRYLA VPPPDTVQQA KKIDEEILQE
301: VINMGFDRNH LIESLRNRTQ NDGTVTYYLI LDNRFRASSG YLGAEFQETM EGTPRMHPAE SVASPVSHRL PGLMEYQGVG LRSQYPVERK WALGLQSRAH
401: PREIMTEVLK ALQDLNVCWK KIGHYNMKCR WVPNSSADGM LSNSMHDNNY FGDESSIIEN EAAVKSPNVV KFEIQLYKTR DDKYLLDLQR VQGPQFLFLD
501: LCAAFLAQLR VL

Arabidopsis Description

KIN10SNF1-related protein kinase catalytic subunit alpha KIN10 [Source:UniProtKB/Swiss-Prot;Acc:Q38997]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.