Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- cytosol 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr10P... | |
| GSMUA_AchrUn_... |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G52180.1 | GSMUA_Achr10P... | AT3G29160.1 | 12148529 |
| AT3G52180.1 | GSMUA_AchrUn_... | AT3G29160.1 | 12148529 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH34699 | Soybean | nucleus | 56.12 | 63.07 |
| KRG92090 | Soybean | plastid | 55.88 | 62.8 |
| KXG40392 | Sorghum | plastid | 55.88 | 62.47 |
| PGSC0003DMT400070294 | Potato | plastid | 54.68 | 61.62 |
| Solyc11g007830.1.1 | Tomato | plastid | 54.2 | 61.08 |
| TraesCS4B01G360800.2 | Wheat | plastid | 53.96 | 60.98 |
| Solyc03g111160.2.1 | Tomato | mitochondrion, plastid | 54.2 | 60.75 |
| TraesCS4D01G353800.1 | Wheat | plastid | 53.72 | 60.7 |
| PGSC0003DMT400039423 | Potato | mitochondrion, plastid | 53.96 | 60.48 |
| VIT_00s0250g00020.t01 | Wine grape | mitochondrion | 54.44 | 60.05 |
| TraesCS5A01G529100.1 | Wheat | plastid | 53.0 | 59.89 |
| Zm00001d027309_P007 | Maize | plastid | 55.4 | 59.08 |
| CDY72539 | Canola | cytosol | 35.01 | 58.87 |
| HORVU4Hr1G086650.11 | Barley | plastid | 53.72 | 57.29 |
| AT3G52180.1 | Thale cress | plastid | 51.08 | 56.2 |
| Bra006908.1-P | Field mustard | plastid | 47.48 | 56.09 |
| CDY23194 | Canola | cytosol, plastid | 49.88 | 55.17 |
| CDX73654 | Canola | mitochondrion, plastid | 49.4 | 54.64 |
| CDX78070 | Canola | mitochondrion, plastid | 48.92 | 54.11 |
| GSMUA_Achr4P00230_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 15.11 | 39.13 |
| Bra033449.1-P | Field mustard | cytosol | 49.16 | 37.14 |
| GSMUA_Achr4P00220_001 | Banana | plastid | 11.27 | 26.4 |
| GSMUA_Achr9P07030_001 | Banana | plastid | 20.38 | 15.65 |
Protein Annotations
| Gene3D:2.60.40.10 | MapMan:3.2.3.2.1 | Gene3D:3.90.190.10 | InterPro:AMPK1_CBM | InterPro:DSP4 | InterPro:Dual-sp_phosphatase_cat-dom |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005975 | GO:GO:0005982 | GO:GO:0005983 | GO:GO:0006464 | GO:GO:0006470 |
| GO:GO:0007623 | GO:GO:0008138 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009987 | GO:GO:0016311 | GO:GO:0016787 | GO:GO:0016791 |
| GO:GO:0019203 | GO:GO:0019538 | GO:GO:0030246 | GO:GO:0030247 | GO:GO:2001066 | EnsemblPlantsGene:GSMUA_Achr8G14150_001 |
| EnsemblPlants:GSMUA_Achr8P14150_001 | EnsemblPlants:GSMUA_Achr8T14150_001 | InterPro:IPR000387 | InterPro:IPR013783 | InterPro:IPR020422 | InterPro:IPR029021 |
| InterPro:Ig-like_fold | InterPro:Ig_E-set | UniProt:M0TQB8 | PFAM:PF00782 | PFAM:PF16561 | PFscan:PS50056 |
| PANTHER:PTHR10343 | PANTHER:PTHR10343:SF58 | InterPro:Prot-tyrosine_phosphatase-like | SMART:SM00195 | SUPFAM:SSF52799 | SUPFAM:SSF81296 |
| InterPro:TYR_PHOSPHATASE_DUAL_dom | InterPro:TYR_PHOSPHATASE_dom | UniParc:UPI0002957C7F | SEG:seg | : | : |
Description
dual specificity protein phosphatase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G14150_001]
Coordinates
chr8:+:10736421..10751163
Molecular Weight (calculated)
46813.4 Da
IEP (calculated)
9.075
GRAVY (calculated)
-0.309
Length
417 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPRQSRSAL YIYEHWAVQL KISRKGPFLF VLALLPPRSS FPRISPAMNS LRSLPTSSAP PSPVPRGRSS RPPTLNLGVI RPHHLRVNVA RSACSKSSAS
101: PEKTGAEVQD QKSEIYSSDM TKAMGAVLTY RHELGMNYNF IYPGLIVGSC LQTPSDVDKL RKIGVKTIFC LQKDSDLEYF GVDIGAIREY AMQCGDIEHL
201: RAEIRDFDAF DLRMRLPAVV SKLYKAINRN GGVTYVHCTA GLGRAPAVAL AYMFWVKGYE LNEGHQLLQS KRACFPKLAA IKSATIDMLI GLSKNHVTLM
301: WKGNECSSVE VSGLDIGWGQ RIPLKFNEEE GVWILEKNLP EGRYEYKYIV DDKWLCNEHE LLTSANNDGH VNNYVEVSSS DTSVEAMGLR KRLASKNVDL
401: TKEERKMIRD FLESYNA
101: PEKTGAEVQD QKSEIYSSDM TKAMGAVLTY RHELGMNYNF IYPGLIVGSC LQTPSDVDKL RKIGVKTIFC LQKDSDLEYF GVDIGAIREY AMQCGDIEHL
201: RAEIRDFDAF DLRMRLPAVV SKLYKAINRN GGVTYVHCTA GLGRAPAVAL AYMFWVKGYE LNEGHQLLQS KRACFPKLAA IKSATIDMLI GLSKNHVTLM
301: WKGNECSSVE VSGLDIGWGQ RIPLKFNEEE GVWILEKNLP EGRYEYKYIV DDKWLCNEHE LLTSANNDGH VNNYVEVSSS DTSVEAMGLR KRLASKNVDL
401: TKEERKMIRD FLESYNA
001: MNCLQNLPRC SVSPLLGFGC IQRDHSSSSS SLKMLISPPI KANDPKSRLV LHAVSESKSS SEMSGVAKDE EKSDEYSQDM TQAMGAVLTY RHELGMNYNF
101: IRPDLIVGSC LQTPEDVDKL RKIGVKTIFC LQQDPDLEYF GVDISSIQAY AKKYSDIQHI RCEIRDFDAF DLRMRLPAVV GTLYKAVKRN GGVTYVHCTA
201: GMGRAPAVAL TYMFWVQGYK LMEAHKLLMS KRSCFPKLDA IRNATIDILT GLKRKTVTLT LKDKGFSRVE ISGLDIGWGQ RIPLTLDKGT GFWILKRELP
301: EGQFEYKYII DGEWTHNEAE PFIGPNKDGH TNNYAKVVDD PTSVDGTTRE RLSSEDPELL EEERSKLIQF LETCSEAEV
101: IRPDLIVGSC LQTPEDVDKL RKIGVKTIFC LQQDPDLEYF GVDISSIQAY AKKYSDIQHI RCEIRDFDAF DLRMRLPAVV GTLYKAVKRN GGVTYVHCTA
201: GMGRAPAVAL TYMFWVQGYK LMEAHKLLMS KRSCFPKLDA IRNATIDILT GLKRKTVTLT LKDKGFSRVE ISGLDIGWGQ RIPLTLDKGT GFWILKRELP
301: EGQFEYKYII DGEWTHNEAE PFIGPNKDGH TNNYAKVVDD PTSVDGTTRE RLSSEDPELL EEERSKLIQF LETCSEAEV
Arabidopsis Description
DSP4SEX4 [Source:UniProtKB/TrEMBL;Acc:A0A178VES0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.