Factsheet for GSMUA_Achr4P00220_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g050230.2.1	Tomato	cytosol	41.01	37.82
Os12t0112500-01	Rice	plasma membrane, plastid	50.0	32.84
Os11t0113100-01	Rice	plasma membrane, plastid	50.0	32.84
Zm00001d044693_P001	Maize	plastid	49.44	31.43
HORVU5Hr1G046860.1	Barley	plastid	48.31	30.5
TraesCS5D01G144600.1	Wheat	plastid	48.31	30.5
TraesCS5A01G148200.1	Wheat	plastid	47.75	30.14
EES15654	Sorghum	plastid	47.19	30.0
TraesCS5B01G146700.1	Wheat	plastid	47.19	29.79
AT3G10940.1	Thale cress	plastid	43.82	27.66
CDY08562	Canola	plastid	44.38	27.62
Bra029881.1-P	Field mustard	plastid	44.38	27.62
CDY00979	Canola	plastid	43.82	27.27
CDY66368	Canola	plastid	43.26	26.92
GSMUA_Achr8P14150_001	Banana	cytosol, golgi, mitochondrion, plastid	26.4	11.27
GSMUA_Achr4P00230_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	7.87	8.7
GSMUA_Achr9P07030_001	Banana	plastid	20.22	6.63
Os03t0107800-01	Rice	cytosol, nucleus	0.0	0.0

Protein Annotations

Gene3D:3.90.190.10	MapMan:35.1	InterPro:DUSP	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005983
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0016787	GO:GO:0019203	GO:GO:0030246	GO:GO:0046838	GO:GO:0050308	GO:GO:2001070
EnsemblPlantsGene:GSMUA_Achr4G00220_001	EnsemblPlants:GSMUA_Achr4P00220_001	EnsemblPlants:GSMUA_Achr4T00220_001	InterPro:IPR029021	UniProt:M0SJT9	PANTHER:PTHR10159
PANTHER:PTHR10159:SF494	InterPro:Prot-tyrosine_phosphatase-like	SUPFAM:SSF52799	UniParc:UPI000295742C	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G00220_001]

Coordinates

chr4:+:203854..205540

Molecular Weight (calculated)

20716.8 Da

IEP (calculated)

7.463

GRAVY (calculated)

-0.508

Length

178 amino acids

Sequence
(BLAST)

001: MGTIFNGSLC SVLPSPRRSL EGISFFRGSN LRNLDSSSRK NSGIRCKISE GGPVEQGSRN NREVEDYNTV MKRMMRNPYE YHHDLGMNYT IINDSLIVGS
101: QPQKPKDIDH LKEAENVAYI LCLQQDKDIE YWGINFQDIL NRCKELGIHH MRRPVSYPPF HPCFIYLFFF VIEECNLY

Best Arabidopsis Sequence Match ( AT3G10940.1 )
(BLAST)

001: MSVIGSKSCI FSVARYTREN EKSSCFTSIN KKSSLDLRFP RNLAGVSCKF SGENPGTNGV SLSSKNKMED YNTAMKRLMR SPYEYHHDLG MNYTLIRDEL
101: IVGSQPQKPE DIDHLKQEQN VAYILNLQQD KDIEYWGIDL DSIVRRCKEL GIRHMRRPAK DFDPLSLRSQ LPKAVSSLEW AVSEGKGRVY VHCSAGLGRA
201: PGVSIAYMYW FCDMNLNTAY DTLVSKRPCG PNKGAIRGAT YDLAKNDPWK EPFESLPENA FEDIADWERK LIQERVRALR GT

Arabidopsis Description

LSF2Phosphoglucan phosphatase LSF2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SRK5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.