Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 2
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00979 | Canola | plastid | 84.04 | 82.87 |
| CDY66368 | Canola | plastid | 83.69 | 82.52 |
| PGSC0003DMT400074765 | Potato | cytosol | 62.41 | 81.86 |
| CDY08562 | Canola | plastid | 82.62 | 81.47 |
| Bra029881.1-P | Field mustard | plastid | 82.27 | 81.12 |
| Solyc06g050230.2.1 | Tomato | cytosol | 46.45 | 67.88 |
| VIT_13s0067g02510.t01 | Wine grape | plastid | 66.31 | 66.08 |
| Os12t0112500-01 | Rice | plasma membrane, plastid | 62.41 | 64.94 |
| Os11t0113100-01 | Rice | plasma membrane, plastid | 62.06 | 64.58 |
| KRH53770 | Soybean | plastid | 64.54 | 61.9 |
| Zm00001d044693_P001 | Maize | plastid | 60.64 | 61.07 |
| EES15654 | Sorghum | plastid | 60.28 | 60.71 |
| TraesCS5D01G144600.1 | Wheat | plastid | 59.93 | 59.93 |
| TraesCS5B01G146700.1 | Wheat | plastid | 59.22 | 59.22 |
| TraesCS5A01G148200.1 | Wheat | plastid | 58.87 | 58.87 |
| HORVU5Hr1G046860.1 | Barley | plastid | 58.87 | 58.87 |
| KRH64175 | Soybean | cytosol | 63.48 | 58.12 |
| GSMUA_Achr4P00220_001 | Banana | plastid | 27.66 | 43.82 |
| AT3G52180.1 | Thale cress | plastid | 32.98 | 24.54 |
| AT3G01510.1 | Thale cress | plastid | 25.53 | 12.18 |
| Os03t0107800-01 | Rice | cytosol, nucleus | 1.42 | 6.35 |
Protein Annotations
| MapMan:18.4.23.2.3 | MapMan:3.2.3.2.2 | Gene3D:3.90.190.10 | PDB:4KYQ | PDB:4KYR | EntrezGene:820265 |
| ProteinID:AAF01527.1 | ProteinID:AEE74980.1 | EMBL:AK226225 | ArrayExpress:AT3G10940 | EnsemblPlantsGene:AT3G10940 | RefSeq:AT3G10940 |
| TAIR:AT3G10940 | RefSeq:AT3G10940-TAIR-G | EnsemblPlants:AT3G10940.1 | TAIR:AT3G10940.1 | EMBL:AY087019 | Unigene:At.39834 |
| EMBL:BT024510 | InterPro:DUSP | InterPro:Dual-sp_phosphatase_cat-dom | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005975 | GO:GO:0005983 |
| GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008138 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016311 | GO:GO:0016787 | GO:GO:0016791 |
| GO:GO:0019203 | GO:GO:0019538 | GO:GO:0030246 | GO:GO:0046838 | GO:GO:0050308 | GO:GO:2001070 |
| InterPro:IPR000387 | InterPro:IPR020422 | InterPro:IPR029021 | RefSeq:NP_566383.1 | PFAM:PF00782 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50054 |
| PFscan:PS50056 | PANTHER:PTHR10159 | PANTHER:PTHR10159:SF494 | InterPro:Prot-tyrosine_phosphatase-like | UniProt:Q9SRK5 | SMART:SM00195 |
| SUPFAM:SSF52799 | InterPro:TYR_PHOSPHATASE_DUAL_dom | InterPro:TYR_PHOSPHATASE_dom | UniParc:UPI00000A3C00 | : | : |
Description
LSF2Phosphoglucan phosphatase LSF2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SRK5]
Coordinates
chr3:-:3422034..3423455
Molecular Weight (calculated)
32089.2 Da
IEP (calculated)
8.625
GRAVY (calculated)
-0.598
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVIGSKSCI FSVARYTREN EKSSCFTSIN KKSSLDLRFP RNLAGVSCKF SGENPGTNGV SLSSKNKMED YNTAMKRLMR SPYEYHHDLG MNYTLIRDEL
101: IVGSQPQKPE DIDHLKQEQN VAYILNLQQD KDIEYWGIDL DSIVRRCKEL GIRHMRRPAK DFDPLSLRSQ LPKAVSSLEW AVSEGKGRVY VHCSAGLGRA
201: PGVSIAYMYW FCDMNLNTAY DTLVSKRPCG PNKGAIRGAT YDLAKNDPWK EPFESLPENA FEDIADWERK LIQERVRALR GT
101: IVGSQPQKPE DIDHLKQEQN VAYILNLQQD KDIEYWGIDL DSIVRRCKEL GIRHMRRPAK DFDPLSLRSQ LPKAVSSLEW AVSEGKGRVY VHCSAGLGRA
201: PGVSIAYMYW FCDMNLNTAY DTLVSKRPCG PNKGAIRGAT YDLAKNDPWK EPFESLPENA FEDIADWERK LIQERVRALR GT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.