Factsheet for TraesCS5B01G146700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G046860.1	Barley	plastid	97.16	97.16
TraesCS5A01G148200.1	Wheat	plastid	96.81	96.81
TraesCS5D01G144600.1	Wheat	plastid	82.98	82.98
PGSC0003DMT400074765	Potato	cytosol	56.03	73.49
Os11t0113100-01	Rice	plasma membrane, plastid	67.02	69.74
Os12t0112500-01	Rice	plasma membrane, plastid	66.31	69.0
Zm00001d044693_P001	Maize	plastid	67.38	67.86
EES15654	Sorghum	plastid	67.38	67.86
Solyc06g050230.2.1	Tomato	cytosol	45.04	65.8
VIT_13s0067g02510.t01	Wine grape	plastid	60.99	60.78
AT3G10940.1	Thale cress	plastid	59.22	59.22
CDY08562	Canola	plastid	59.57	58.74
CDY00979	Canola	plastid	59.57	58.74
Bra029881.1-P	Field mustard	plastid	59.57	58.74
CDY66368	Canola	plastid	59.22	58.39
KRH53770	Soybean	plastid	59.57	57.14
KRH64175	Soybean	cytosol	58.87	53.9
GSMUA_Achr4P00220_001	Banana	plastid	29.79	47.19
TraesCS4B01G360800.2	Wheat	plastid	32.98	25.2
TraesCS1B01G466300.1	Wheat	plastid	23.4	11.09

Protein Annotations

MapMan:18.4.23.2.3	MapMan:3.2.3.2.2	Gene3D:3.90.190.10	InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005975	GO:GO:0005983	GO:GO:0006464	GO:GO:0006470	GO:GO:0008138	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016311
GO:GO:0016787	GO:GO:0016791	GO:GO:0019203	GO:GO:0019538	GO:GO:0030246	GO:GO:0046838
GO:GO:0050308	GO:GO:2001070	InterPro:IPR000387	InterPro:IPR020422	InterPro:IPR029021	PFAM:PF00782
PFscan:PS50054	PFscan:PS50056	PANTHER:PTHR10159	PANTHER:PTHR10159:SF494	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195
SUPFAM:SSF52799	InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom	EnsemblPlantsGene:TraesCS5B01G146700	EnsemblPlants:TraesCS5B01G146700.1	SEG:seg

Description

No Description!

Coordinates

chr5B:+:275169186..275172492

Molecular Weight (calculated)

31078.3 Da

IEP (calculated)

8.999

GRAVY (calculated)

-0.379

Length

282 amino acids

Sequence
(BLAST)

001: MAATANASCL PASPRLPASG ARVRNRGMLP MAAVGCTAGR GGVHLRSARP LLCTSSSAAA GARGSGKMED YNTAMKRMMR NPYEYHHDLG MNYAVISDSL
101: IVGSQPQKPD DIDHLKNEEN VAYILCLQQD KDIEYWGIDF EAVVTRCKEL GIQHMRRPAV DFDPDSLRKQ LPKAVSALEW AISQGKGRVY IHCTAGLGRA
201: PAVAISYMFW FENMDLNTAY DKLTSIRPCG PSKKAIRSAT YDLAKSDPNK EAFETLPERA FEGISVSERK LIQDRVRSLH KA

Best Arabidopsis Sequence Match ( AT3G10940.1 )
(BLAST)

001: MSVIGSKSCI FSVARYTREN EKSSCFTSIN KKSSLDLRFP RNLAGVSCKF SGENPGTNGV SLSSKNKMED YNTAMKRLMR SPYEYHHDLG MNYTLIRDEL
101: IVGSQPQKPE DIDHLKQEQN VAYILNLQQD KDIEYWGIDL DSIVRRCKEL GIRHMRRPAK DFDPLSLRSQ LPKAVSSLEW AVSEGKGRVY VHCSAGLGRA
201: PGVSIAYMYW FCDMNLNTAY DTLVSKRPCG PNKGAIRGAT YDLAKNDPWK EPFESLPENA FEDIADWERK LIQERVRALR GT

Arabidopsis Description

LSF2Phosphoglucan phosphatase LSF2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SRK5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.