CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044693_P001	Maize	plastid	84.29	84.29
PGSC0003DMT400074765	Potato	cytosol	59.64	77.67
Os12t0112500-01	Rice	plasma membrane, plastid	70.0	72.32
Os11t0113100-01	Rice	plasma membrane, plastid	70.0	72.32
TraesCS5D01G144600.1	Wheat	plastid	70.0	69.5
HORVU5Hr1G046860.1	Barley	plastid	68.93	68.44
TraesCS5B01G146700.1	Wheat	plastid	67.86	67.38
TraesCS5A01G148200.1	Wheat	plastid	67.14	66.67
Solyc06g050230.2.1	Tomato	cytosol	45.36	65.8
CDY00979	Canola	plastid	62.5	61.19
CDY08562	Canola	plastid	62.5	61.19
Bra029881.1-P	Field mustard	plastid	62.14	60.84
CDY66368	Canola	plastid	62.14	60.84
AT3G10940.1	Thale cress	plastid	60.71	60.28
VIT_13s0067g02510.t01	Wine grape	plastid	60.36	59.72
KRH53770	Soybean	plastid	61.07	58.16
KRH64175	Soybean	cytosol	60.36	54.87
GSMUA_Achr4P00220_001	Banana	plastid	30.0	47.19
KXG40392	Sorghum	plastid	33.57	25.2
OQU80369	Sorghum	mitochondrion	25.36	12.96

Protein Annotations

MapMan:18.4.23.2.3	MapMan:3.2.3.2.2	Gene3D:3.90.190.10	EntrezGene:8066946	UniProt:C5YRM6	InterPro:DUSP
InterPro:Dual-sp_phosphatase_cat-dom	EnsemblPlants:EES15654	ProteinID:EES15654	ProteinID:EES15654.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975
GO:GO:0005983	GO:GO:0006464	GO:GO:0006470	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787
GO:GO:0016791	GO:GO:0019203	GO:GO:0019538	GO:GO:0030246	GO:GO:0046838	GO:GO:0050308
GO:GO:2001070	InterPro:IPR000387	InterPro:IPR020422	InterPro:IPR029021	PFAM:PF00782	PFscan:PS50054
PFscan:PS50056	PANTHER:PTHR10159	PANTHER:PTHR10159:SF494	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195	EnsemblPlantsGene:SORBI_3008G032300
SUPFAM:SSF52799	unigene:Sbi.8538	InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom	UniParc:UPI0001A88561	RefSeq:XP_002441816.1

Description

hypothetical protein

Coordinates

chr8:+:2885844..2893634

Molecular Weight (calculated)

31595.9 Da

IEP (calculated)

9.161

GRAVY (calculated)

-0.479

Length

280 amino acids

Sequence
(BLAST)

001: MAAMANTSRL PTPYSLPTVN IGGKCRRLAM AAVRCGPGGS RSHRRSLGVF LCRSSSTAGA QGSTRMEDYN TAMKRMMRNP YEYHHDLGMN YAVISESLIV
101: GSQPQKPEDI DHLKDEERVA YILCLQQDKD IEYWGIDFQS ILNRCKELGI QHIRKPAVDF DPDSLRSQLP KAVSALEWAI SQRKGRVYIH CTAGLGRAPA
201: VAIAYMFWFE NMDLNTAYKK LTTIRPCGPS KRAIRAATYD LAKNDPSKEP FENLPEHAFE GIADWERKLI QDRVRALREA

Best Arabidopsis Sequence Match ( AT3G10940.1 )
(BLAST)

001: MSVIGSKSCI FSVARYTREN EKSSCFTSIN KKSSLDLRFP RNLAGVSCKF SGENPGTNGV SLSSKNKMED YNTAMKRLMR SPYEYHHDLG MNYTLIRDEL
101: IVGSQPQKPE DIDHLKQEQN VAYILNLQQD KDIEYWGIDL DSIVRRCKEL GIRHMRRPAK DFDPLSLRSQ LPKAVSSLEW AVSEGKGRVY VHCSAGLGRA
201: PGVSIAYMYW FCDMNLNTAY DTLVSKRPCG PNKGAIRGAT YDLAKNDPWK EPFESLPENA FEDIADWERK LIQERVRALR GT

Arabidopsis Description

LSF2Phosphoglucan phosphatase LSF2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SRK5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.