Factsheet for PGSC0003DMT400074765

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g050230.2.1	Tomato	cytosol	70.23	78.24
GSMUA_Achr4P00230_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	50.23	67.08
VIT_13s0067g02510.t01	Wine grape	plastid	82.33	62.54
AT3G10940.1	Thale cress	plastid	81.86	62.41
CDY08562	Canola	plastid	82.33	61.89
Bra029881.1-P	Field mustard	plastid	81.86	61.54
CDY00979	Canola	plastid	81.86	61.54
CDY66368	Canola	plastid	81.4	61.19
Os11t0113100-01	Rice	plasma membrane, plastid	76.28	60.52
Os12t0112500-01	Rice	plasma membrane, plastid	75.81	60.15
Zm00001d044693_P001	Maize	plastid	78.14	60.0
KRH53770	Soybean	plastid	81.86	59.86
EES15654	Sorghum	plastid	77.67	59.64
HORVU5Hr1G046860.1	Barley	plastid	73.49	56.03
TraesCS5B01G146700.1	Wheat	plastid	73.49	56.03
TraesCS5D01G144600.1	Wheat	plastid	73.49	56.03
KRH64175	Soybean	cytosol	80.0	55.84
TraesCS5A01G148200.1	Wheat	plastid	72.56	55.32
PGSC0003DMT400039423	Potato	mitochondrion, plastid	41.4	23.92
PGSC0003DMT400070294	Potato	plastid	39.53	22.97
PGSC0003DMT400077364	Potato	plastid	30.23	10.98
Os03t0107800-01	Rice	cytosol, nucleus	1.86	6.35

Protein Annotations

MapMan:18.4.23.2.3	MapMan:3.2.3.2.2	Gene3D:3.90.190.10	InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0006464	GO:GO:0006470	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	GO:GO:0019538	InterPro:IPR000387
InterPro:IPR020422	InterPro:IPR029021	UniProt:M1CU53	PFAM:PF00782	EnsemblPlantsGene:PGSC0003DMG400029073	PGSC:PGSC0003DMG400029073
EnsemblPlants:PGSC0003DMT400074765	PFscan:PS50054	PFscan:PS50056	PANTHER:PTHR10159	PANTHER:PTHR10159:SF494	InterPro:Prot-tyrosine_phosphatase-like
SMART:SM00195	SUPFAM:SSF52799	InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom	UniParc:UPI000296E4AE	:

Description

Dual specificity protein phosphatase [Source:PGSC_GENE;Acc:PGSC0003DMG400029073]

Coordinates

chr6:+:31830583..31835063

Molecular Weight (calculated)

24916.6 Da

IEP (calculated)

5.000

GRAVY (calculated)

-0.496

Length

215 amino acids

Sequence
(BLAST)

001: MEEYNLAMKR MMRNPYEYHH ELGMNYTLIT EDLIVGSQPQ KVEDIDYLKE EENVAFILNL QQDKDIEFWG IDLQSIITRC SELGIHHMRR PARDFDPDSL
101: RSVLPKAVSS LEWAISEGKG RVYVHCTAGL GRAPAVSIAY MFWFCGMDLN TAYDTLVSKR PCGPNKRSIQ GATYDLAKND QWKEPFENLP DYAFADVADW
201: ERKLIQDRVR ALRDT

Best Arabidopsis Sequence Match ( AT3G10940.1 )
(BLAST)

001: MSVIGSKSCI FSVARYTREN EKSSCFTSIN KKSSLDLRFP RNLAGVSCKF SGENPGTNGV SLSSKNKMED YNTAMKRLMR SPYEYHHDLG MNYTLIRDEL
101: IVGSQPQKPE DIDHLKQEQN VAYILNLQQD KDIEYWGIDL DSIVRRCKEL GIRHMRRPAK DFDPLSLRSQ LPKAVSSLEW AVSEGKGRVY VHCSAGLGRA
201: PGVSIAYMYW FCDMNLNTAY DTLVSKRPCG PNKGAIRGAT YDLAKNDPWK EPFESLPENA FEDIADWERK LIQERVRALR GT

Arabidopsis Description

LSF2Phosphoglucan phosphatase LSF2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SRK5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.