Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400074765 | Potato | cytosol | 6.35 | 1.86 |
| Os08t0379300-01 | Rice | plastid | 17.46 | 1.85 |
| Os11t0113100-01 | Rice | plasma membrane, plastid | 6.35 | 1.48 |
| Os12t0112500-01 | Rice | plasma membrane, plastid | 6.35 | 1.48 |
| AT3G10940.1 | Thale cress | plastid | 6.35 | 1.42 |
| KRH53770 | Soybean | plastid | 6.35 | 1.36 |
| KRH64175 | Soybean | cytosol | 6.35 | 1.3 |
| VIT_13s0067g02510.t01 | Wine grape | plastid | 4.76 | 1.06 |
| Bra029881.1-P | Field mustard | plastid | 4.76 | 1.05 |
| CDY00979 | Canola | plastid | 4.76 | 1.05 |
| CDY08562 | Canola | plastid | 4.76 | 1.05 |
| CDY66368 | Canola | plastid | 4.76 | 1.05 |
| Solyc06g050230.2.1 | Tomato | cytosol | 3.17 | 1.04 |
| GSMUA_Achr4P00220_001 | Banana | plastid | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.2 | ProteinID:BAF10610.1 | ProteinID:BAS81888.1 | InterPro:DSP4 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005975 | GO:GO:0005982 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0007623 | GO:GO:0008138 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016311 | GO:GO:0016787 | GO:GO:0016791 |
| GO:GO:0019203 | GO:GO:0019538 | EnsemblPlantsGene:Os03g0107800 | EnsemblPlants:Os03t0107800-01 | PANTHER:PTHR10343 | PANTHER:PTHR10343:SF58 |
| UniProt:Q0DVX8 | UniParc:UPI0000E11EC8 | : | : | : | : |
Description
Protein phosphatase 42Similar to Starch excess 4. (Os03t0107800-01);Hypothetical conserved gene. (Os03t0107800-02)
Coordinates
chr3:-:471470..472258
Molecular Weight (calculated)
7485.5 Da
IEP (calculated)
4.654
GRAVY (calculated)
-1.541
Length
63 amino acids
Sequence
(BLAST)
(BLAST)
1: CNDNEKKTKA NADGHVNNYV QVSRDGTSDE ERELRERLTG QNPDLTKEER LMIREYLEQY VER
001: MNCLQNLPRC SVSPLLGFGC IQRDHSSSSS SLKMLISPPI KANDPKSRLV LHAVSESKSS SEMSGVAKDE EKSDEYSQDM TQAMGAVLTY RHELGMNYNF
101: IRPDLIVGSC LQTPEDVDKL RKIGVKTIFC LQQDPDLEYF GVDISSIQAY AKKYSDIQHI RCEIRDFDAF DLRMRLPAVV GTLYKAVKRN GGVTYVHCTA
201: GMGRAPAVAL TYMFWVQGYK LMEAHKLLMS KRSCFPKLDA IRNATIDILT GLKRKTVTLT LKDKGFSRVE ISGLDIGWGQ RIPLTLDKGT GFWILKRELP
301: EGQFEYKYII DGEWTHNEAE PFIGPNKDGH TNNYAKVVDD PTSVDGTTRE RLSSEDPELL EEERSKLIQF LETCSEAEV
101: IRPDLIVGSC LQTPEDVDKL RKIGVKTIFC LQQDPDLEYF GVDISSIQAY AKKYSDIQHI RCEIRDFDAF DLRMRLPAVV GTLYKAVKRN GGVTYVHCTA
201: GMGRAPAVAL TYMFWVQGYK LMEAHKLLMS KRSCFPKLDA IRNATIDILT GLKRKTVTLT LKDKGFSRVE ISGLDIGWGQ RIPLTLDKGT GFWILKRELP
301: EGQFEYKYII DGEWTHNEAE PFIGPNKDGH TNNYAKVVDD PTSVDGTTRE RLSSEDPELL EEERSKLIQF LETCSEAEV
Arabidopsis Description
DSP4SEX4 [Source:UniProtKB/TrEMBL;Acc:A0A178VES0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.