Factsheet for Os12t0112500-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0113100-01	Rice	plasma membrane, plastid	97.79	97.79
PGSC0003DMT400074765	Potato	cytosol	60.15	75.81
EES15654	Sorghum	plastid	72.32	70.0
Zm00001d044693_P001	Maize	plastid	72.32	70.0
HORVU5Hr1G046860.1	Barley	plastid	70.11	67.38
TraesCS5D01G144600.1	Wheat	plastid	70.11	67.38
TraesCS5A01G148200.1	Wheat	plastid	69.37	66.67
TraesCS5B01G146700.1	Wheat	plastid	69.0	66.31
Solyc06g050230.2.1	Tomato	cytosol	46.86	65.8
CDY00979	Canola	plastid	66.05	62.59
AT3G10940.1	Thale cress	plastid	64.94	62.41
CDY08562	Canola	plastid	65.68	62.24
CDY66368	Canola	plastid	65.68	62.24
Bra029881.1-P	Field mustard	plastid	65.31	61.89
VIT_13s0067g02510.t01	Wine grape	plastid	63.1	60.42
KRH53770	Soybean	plastid	64.21	59.18
KRH64175	Soybean	cytosol	62.36	54.87
GSMUA_Achr4P00220_001	Banana	plastid	32.84	50.0
Os08t0379300-01	Rice	plastid	26.2	11.97
Os03t0107800-01	Rice	cytosol, nucleus	1.48	6.35

Protein Annotations

MapMan:18.4.23.2.3	MapMan:3.2.3.2.2	Gene3D:3.90.190.10	EntrezGene:4351304	ProteinID:ABA96264.1	ProteinID:BAT15575.1
ncoils:Coil	InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464
GO:GO:0006470	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016311
GO:GO:0016787	GO:GO:0016791	GO:GO:0019538	InterPro:IPR000387	InterPro:IPR020422	InterPro:IPR029021
EnsemblPlantsGene:Os12g0112500	EnsemblPlants:Os12t0112500-01	PFAM:PF00782	PFscan:PS50054	PFscan:PS50056	PANTHER:PTHR10159
PANTHER:PTHR10159:SF494	InterPro:Prot-tyrosine_phosphatase-like	UniProt:Q2QYN1	SMART:SM00195	SUPFAM:SSF52799	InterPro:TYR_PHOSPHATASE_DUAL_dom
InterPro:TYR_PHOSPHATASE_dom	UniParc:UPI0000681B86	RefSeq:XP_015619394.1	SEG:seg	:	:

Description

Protein phosphatase 124Protein-tyrosine phosphatase, dual specificity domain containing protein. (Os12t0112500-01)

Coordinates

chr12:-:639913..646681

Molecular Weight (calculated)

30386.3 Da

IEP (calculated)

9.167

GRAVY (calculated)

-0.497

Length

271 amino acids

Sequence
(BLAST)

001: MAAMATAPCF PATPGLPARG AVAARSRMAA GGSRSQRRRS SSGVFLCRSS TTGSTRMEDY NTAMKRMMRN PYEYHHDLGM NYAIISDSLI VGSQPQKPED
101: IDHLKDEEKV AFILCLQQDK DIEYWGIDFQ TVVNRCKELG IKHIRRPAVD FDPDSLRTQL PKAVASLEWA ISEGKGRVYV HCTAGLGRAP AVAIAYMFWF
201: ENMNLKTAYE KLTSKRPCGP NKRAIRAATY DLAKNDPHKE SFDSLPEHAF EGIADSERRL IQERVRALRE A

Best Arabidopsis Sequence Match ( AT3G10940.1 )
(BLAST)

001: MSVIGSKSCI FSVARYTREN EKSSCFTSIN KKSSLDLRFP RNLAGVSCKF SGENPGTNGV SLSSKNKMED YNTAMKRLMR SPYEYHHDLG MNYTLIRDEL
101: IVGSQPQKPE DIDHLKQEQN VAYILNLQQD KDIEYWGIDL DSIVRRCKEL GIRHMRRPAK DFDPLSLRSQ LPKAVSSLEW AVSEGKGRVY VHCSAGLGRA
201: PGVSIAYMYW FCDMNLNTAY DTLVSKRPCG PNKGAIRGAT YDLAKNDPWK EPFESLPENA FEDIADWERK LIQERVRALR GT

Arabidopsis Description

LSF2Phosphoglucan phosphatase LSF2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SRK5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.