Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH53770 | Soybean | plastid | 79.22 | 82.99 |
PGSC0003DMT400074765 | Potato | cytosol | 55.84 | 80.0 |
VIT_13s0067g02510.t01 | Wine grape | plastid | 64.94 | 70.67 |
GSMUA_Achr4P00230_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 36.04 | 68.94 |
Solyc06g050230.2.1 | Tomato | cytosol | 41.56 | 66.32 |
CDY66368 | Canola | plastid | 59.42 | 63.99 |
CDY00979 | Canola | plastid | 59.09 | 63.64 |
CDY08562 | Canola | plastid | 59.09 | 63.64 |
AT3G10940.1 | Thale cress | plastid | 58.12 | 63.48 |
Bra029881.1-P | Field mustard | plastid | 58.77 | 63.29 |
Os12t0112500-01 | Rice | plasma membrane, plastid | 54.87 | 62.36 |
Os11t0113100-01 | Rice | plasma membrane, plastid | 54.55 | 61.99 |
Zm00001d044693_P001 | Maize | plastid | 54.87 | 60.36 |
EES15654 | Sorghum | plastid | 54.87 | 60.36 |
HORVU5Hr1G046860.1 | Barley | plastid | 54.22 | 59.22 |
TraesCS5B01G146700.1 | Wheat | plastid | 53.9 | 58.87 |
TraesCS5D01G144600.1 | Wheat | plastid | 53.25 | 58.16 |
TraesCS5A01G148200.1 | Wheat | plastid | 52.92 | 57.8 |
KRH34699 | Soybean | nucleus | 31.17 | 25.88 |
KRG92090 | Soybean | plastid | 31.17 | 25.88 |
KRH07193 | Soybean | plastid | 26.95 | 14.19 |
KRG94231 | Soybean | plastid | 26.95 | 14.09 |
Os03t0107800-01 | Rice | cytosol, nucleus | 1.3 | 6.35 |
Protein Annotations
MapMan:18.4.23.2.3 | MapMan:3.2.3.2.2 | Gene3D:3.90.190.10 | EMBL:ACUP02002745 | InterPro:DUSP | InterPro:Dual-sp_phosphatase_cat-dom |
EnsemblPlantsGene:GLYMA_04G220900 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005737 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008138 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016311 | GO:GO:0016787 | GO:GO:0016791 |
GO:GO:0019538 | InterPro:IPR000387 | InterPro:IPR020422 | InterPro:IPR029021 | UniProt:K7KLM4 | ProteinID:KRH64174.1 |
EnsemblPlants:KRH64175 | ProteinID:KRH64175 | ProteinID:KRH64175.1 | PFAM:PF00782 | PFscan:PS50054 | PFscan:PS50056 |
PANTHER:PTHR10159 | PANTHER:PTHR10159:SF494 | InterPro:Prot-tyrosine_phosphatase-like | SMART:SM00195 | SUPFAM:SSF52799 | InterPro:TYR_PHOSPHATASE_DUAL_dom |
InterPro:TYR_PHOSPHATASE_dom | UniParc:UPI0002969158 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:49180330..49183817
Molecular Weight (calculated)
35482.0 Da
IEP (calculated)
6.585
GRAVY (calculated)
-0.695
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MLHKNSLEPT RHEQREMGTV SNIGFPSLFR VHLDSQVLSK HMKNKSSCDF MVPSNHNYSV RLSPICCKLS ESGIEENHTS TSTGERPSKI KDRMEEYNIA
101: MKKMMRNPYE YHHDLGMNYT LITDNLIVGS QPQKPEDIDH LKKEEGVAYI LNLQQDNDVE YWGVDLQSII RRSRELEISH TRRPAKDFDP DSLQNELPKA
201: VSSLEWAISE GKGRVYVHCT AGLGRAPAVA IAYLFWFCDM NLNEAYDMLT SKRPCGPNKR AIRGATYDLA KNDPWKEPFE TLPEYAFEDI ADWERNLIQD
301: RARSLRGI
101: MKKMMRNPYE YHHDLGMNYT LITDNLIVGS QPQKPEDIDH LKKEEGVAYI LNLQQDNDVE YWGVDLQSII RRSRELEISH TRRPAKDFDP DSLQNELPKA
201: VSSLEWAISE GKGRVYVHCT AGLGRAPAVA IAYLFWFCDM NLNEAYDMLT SKRPCGPNKR AIRGATYDLA KNDPWKEPFE TLPEYAFEDI ADWERNLIQD
301: RARSLRGI
001: MSVIGSKSCI FSVARYTREN EKSSCFTSIN KKSSLDLRFP RNLAGVSCKF SGENPGTNGV SLSSKNKMED YNTAMKRLMR SPYEYHHDLG MNYTLIRDEL
101: IVGSQPQKPE DIDHLKQEQN VAYILNLQQD KDIEYWGIDL DSIVRRCKEL GIRHMRRPAK DFDPLSLRSQ LPKAVSSLEW AVSEGKGRVY VHCSAGLGRA
201: PGVSIAYMYW FCDMNLNTAY DTLVSKRPCG PNKGAIRGAT YDLAKNDPWK EPFESLPENA FEDIADWERK LIQERVRALR GT
101: IVGSQPQKPE DIDHLKQEQN VAYILNLQQD KDIEYWGIDL DSIVRRCKEL GIRHMRRPAK DFDPLSLRSQ LPKAVSSLEW AVSEGKGRVY VHCSAGLGRA
201: PGVSIAYMYW FCDMNLNTAY DTLVSKRPCG PNKGAIRGAT YDLAKNDPWK EPFESLPENA FEDIADWERK LIQERVRALR GT
Arabidopsis Description
LSF2Phosphoglucan phosphatase LSF2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SRK5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.