Factsheet for GSMUA_Achr4P00230_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

nucleus 1
cytosol 3
plastid 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074765	Potato	cytosol	67.08	50.23
VIT_13s0067g02510.t01	Wine grape	plastid	70.19	39.93
KRH53770	Soybean	plastid	68.94	37.76
KRH64175	Soybean	cytosol	68.94	36.04
GSMUA_Achr8P14150_001	Banana	cytosol, golgi, mitochondrion, plastid	39.13	15.11
GSMUA_Achr9P07030_001	Banana	plastid	29.81	8.84
GSMUA_Achr4P00220_001	Banana	plastid	8.7	7.87

Protein Annotations

Gene3D:3.90.190.10	MapMan:35.1	InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0006464	GO:GO:0006470	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr4G00230_001	EnsemblPlants:GSMUA_Achr4P00230_001
EnsemblPlants:GSMUA_Achr4T00230_001	InterPro:IPR000387	InterPro:IPR020422	InterPro:IPR029021	UniProt:M0SJU0	PFAM:PF00782
PFscan:PS50054	PFscan:PS50056	PANTHER:PTHR10159	PANTHER:PTHR10159:SF494	InterPro:Prot-tyrosine_phosphatase-like	SUPFAM:SSF52799
InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom	UniParc:UPI0002948D82	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G00230_001]

Coordinates

chr4:+:205702..208167

Molecular Weight (calculated)

18140.8 Da

IEP (calculated)

7.385

GRAVY (calculated)

-0.165

Length

161 amino acids

Sequence
(BLAST)

001: MIRFLFYTAT LDSSLEAVIT FDELDHLLCL IKIRELLARD FDPDSLRSQL PKAVSSLEWA ISEGKGRVYV HCTAGLGRAP AVAISYLFWF CDMDLNTAYN
101: TVTSKRPCGP NKRAIRGATY DLAKNDPWKE PFESLPEHAF GGIADWERKL IRDRVRGLGG T

Best Arabidopsis Sequence Match ( AT3G10940.1 )
(BLAST)

001: MSVIGSKSCI FSVARYTREN EKSSCFTSIN KKSSLDLRFP RNLAGVSCKF SGENPGTNGV SLSSKNKMED YNTAMKRLMR SPYEYHHDLG MNYTLIRDEL
101: IVGSQPQKPE DIDHLKQEQN VAYILNLQQD KDIEYWGIDL DSIVRRCKEL GIRHMRRPAK DFDPLSLRSQ LPKAVSSLEW AVSEGKGRVY VHCSAGLGRA
201: PGVSIAYMYW FCDMNLNTAY DTLVSKRPCG PNKGAIRGAT YDLAKNDPWK EPFESLPENA FEDIADWERK LIQERVRALR GT

Arabidopsis Description

LSF2Phosphoglucan phosphatase LSF2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SRK5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.