Factsheet for Os11t0113100-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0112500-01	Rice	plasma membrane, plastid	97.79	97.79
PGSC0003DMT400074765	Potato	cytosol	60.52	76.28
EES15654	Sorghum	plastid	72.32	70.0
Zm00001d044693_P001	Maize	plastid	72.32	70.0
HORVU5Hr1G046860.1	Barley	plastid	70.85	68.09
TraesCS5D01G144600.1	Wheat	plastid	70.85	68.09
TraesCS5A01G148200.1	Wheat	plastid	70.11	67.38
Solyc06g050230.2.1	Tomato	cytosol	47.97	67.36
TraesCS5B01G146700.1	Wheat	plastid	69.74	67.02
CDY00979	Canola	plastid	65.68	62.24
AT3G10940.1	Thale cress	plastid	64.58	62.06
CDY08562	Canola	plastid	65.31	61.89
CDY66368	Canola	plastid	65.31	61.89
Bra029881.1-P	Field mustard	plastid	64.94	61.54
VIT_13s0067g02510.t01	Wine grape	plastid	63.47	60.78
KRH53770	Soybean	plastid	63.84	58.84
KRH64175	Soybean	cytosol	61.99	54.55
GSMUA_Achr4P00220_001	Banana	plastid	32.84	50.0
Os08t0379300-01	Rice	plastid	26.57	12.14
Os03t0107800-01	Rice	cytosol, nucleus	1.48	6.35

Protein Annotations

MapMan:18.4.23.2.3	MapMan:3.2.3.2.2	Gene3D:3.90.190.10	EntrezGene:4349591	ProteinID:ABA91166.1	EMBL:AK072567
ProteinID:BAF27416.1	ProteinID:BAT12385.1	InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005982
GO:GO:0006464	GO:GO:0006470	GO:GO:0007623	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0016791
GO:GO:0019203	GO:GO:0019538	InterPro:IPR000387	InterPro:IPR020422	InterPro:IPR029021	EnsemblPlantsGene:Os11g0113100
EnsemblPlants:Os11t0113100-01	PFAM:PF00782	PFscan:PS50054	PFscan:PS50056	PANTHER:PTHR10159	PANTHER:PTHR10159:SF494
InterPro:Prot-tyrosine_phosphatase-like	UniProt:Q2RBF6	SMART:SM00195	SUPFAM:SSF52799	InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom
UniParc:UPI00006825D4	RefSeq:XP_015616821.1	SEG:seg	:	:	:

Description

Protein phosphatase 117Protein-tyrosine phosphatase, dual specificity domain containing protein. (Os11t0113100-01)

Coordinates

chr11:-:602587..606841

Molecular Weight (calculated)

30290.2 Da

IEP (calculated)

8.972

GRAVY (calculated)

-0.484

Length

271 amino acids

Sequence
(BLAST)

001: MAAMATAPCF PATPGLPARG AVAARSRMAA GGSRSQRRRS SSGVFLCRSS TTGSSRMEDY NTAMKRMMRN PYEYHHDLGM NYAIISDSLI VGSQPQKPED
101: IDHLKDEEKV AFILCLQQDK DIEYWGIDFQ TVVNRCKELG IKHIRRPAVD FDPDSLRTQL PKAVSSLEWA ISEGKGRVYV HCTAGLGRAP AVAIAYMFWF
201: ENMDLRTAYE KLTSKRPCGP NKRAIRAATY DLAKNDPHKE SFDSLPEHAF EGIAGSERSL IQERVRALRE A

Best Arabidopsis Sequence Match ( AT3G10940.1 )
(BLAST)

001: MSVIGSKSCI FSVARYTREN EKSSCFTSIN KKSSLDLRFP RNLAGVSCKF SGENPGTNGV SLSSKNKMED YNTAMKRLMR SPYEYHHDLG MNYTLIRDEL
101: IVGSQPQKPE DIDHLKQEQN VAYILNLQQD KDIEYWGIDL DSIVRRCKEL GIRHMRRPAK DFDPLSLRSQ LPKAVSSLEW AVSEGKGRVY VHCSAGLGRA
201: PGVSIAYMYW FCDMNLNTAY DTLVSKRPCG PNKGAIRGAT YDLAKNDPWK EPFESLPENA FEDIADWERK LIQERVRALR GT

Arabidopsis Description

LSF2Phosphoglucan phosphatase LSF2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SRK5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.